FFCP PHASE1:Hg19::chr2:197664344..197664351,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9330 | |EntrezGene=9330 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4666 | |HGNC=4666 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=31bp_to_ENST00000409364_5end | |association_with_transcript=31bp_to_ENST00000409364_5end | ||
|cluster_id=chr2:197664344..197664351,- | |||
|description=CAGE_peak_3_at_GTF3C3_5end | |description=CAGE_peak_3_at_GTF3C3_5end | ||
|id=chr2:197664344..197664351,- | |id=chr2:197664344..197664351,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002581;4.22e-21;1!CL:0000182;1.65e-15;12!CL:0000346;6.34e-08;3!CL:1000428;6.34e-08;3 | |ontology_enrichment_celltype_v019=CL:0002581;4.22e-21;1!CL:0000182;1.65e-15;12!CL:0000346;6.34e-08;3!CL:1000428;6.34e-08;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002581,4.22e-21,1;CL:0000182,1.50e-15,12;CL:0000346,6.78e-08,3;CL:1000428,6.78e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0004161;7.48e-17;11!UBERON:0009497;2.27e-14;13!UBERON:0003104;1.67e-10;31 | |ontology_enrichment_development_v019=UBERON:0004161;7.48e-17;11!UBERON:0009497;2.27e-14;13!UBERON:0003104;1.67e-10;31 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0005406;3.02e-11;2!UBERON:0002107;4.87e-10;19!UBERON:0006925;4.87e-10;19!UBERON:0000412;6.34e-08;3!UBERON:0001992;6.34e-08;3!UBERON:0002423;9.02e-08;25 | |ontology_enrichment_uberon_v019=UBERON:0005406;3.02e-11;2!UBERON:0002107;4.87e-10;19!UBERON:0006925;4.87e-10;19!UBERON:0000412;6.34e-08;3!UBERON:0001992;6.34e-08;3!UBERON:0002423;9.02e-08;25 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005406,3.02e-11,2;UBERON:0002107,4.58e-10,19;UBERON:0006925,4.58e-10,19;UBERON:0008836,4.58e-10,19;UBERON:0008835,8.94e-09,22;UBERON:0003894,8.94e-09,22;UBERON:0009854,2.03e-08,23;UBERON:0000412,6.78e-08,3;UBERON:0001992,6.78e-08,3;UBERON:0007499,8.61e-08,25;UBERON:0009497,8.61e-08,25;UBERON:0000015,8.61e-08,25;UBERON:0002423,8.61e-08,25;UBERON:0006235,8.61e-08,25;UBERON:0004161,8.61e-08,25;UBERON:0009856,1.63e-07,26 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0.245733936501509,0,0,0,0.247532705920093,0,0,0,0,0,0.123121058076788,0,0,0.572471974262113,0,0,0.229240217243854,0.410502947249729,0.157421562627358,0,0.383829398097213,0,0,0,0,0.232401601740905,0.568676929949686,0.293600439334847,0,0.200544447470142,0,0.671746422719773,0.647787332037959,0.515151135268373,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0.612167784741805,0,0,0,0,0.426224750532694,0,0,0,0,0,0,0,0.736555271975129,0,0,0,0,0,0,0.16072558669708,0,0.19891667719909,0.365328307529268,0,0.546138611262131,0,0.426730222566507,0.400395987036012,0,0,0,0,0.587237189370939,0.382273228125229,1.32171328579026,1.68152568894461,0.526768169550154,0.393419540227666,0,0.411202997999018,0,0.651844533267181,0,0,0.334231370655521,0.294605907474837,0,0,0,0.130059347559878,0.164437904603676,0.276350017785848,0.289803085735052,0.741432815810302,0.267540828089713,0,0.226618685395132,0,0,0,0,0,0,0.301150238155546,0.255973222308837,0,0.473554504088034,0.821127996921047,0.201606743224732,0,0,0,0,0.255725123687061,0,0.50133791063589,0,0,0,0.189069634328136,0,0.087834785693126,0.0654895377488563,0,0,0,0.348259474598534,0.398873881556595,0.715471872916026,0,0.371457501329565,0,0,0,0,0,0,0,0.258416759169329,0,0.33472061276467,0,0,0,0,0,0.535798369704479,0.22452937262617,0.225222960966644,0,0,0.183201743930407,0,0,0,0,0.25326102332916,0,0.286836620748814,0,0,0,0,0.622422070799533,0.134710672069688,0,0.151357427644931,0,0,0,0,0,0,0.161872944368132,0,0,0.122834317311768,0,0,0,0,0,0.168336113954066,0,0,0,0,0.150238058906597,0.226864366320042,0.358779271377724,0,0,0,0,0,0,0,0.0974370051611986,0.504867548488229,0.276149695926898,0,0,0,0.339121184620975,0,0,0,0.121973706129595,0.530119073285941,0.580969714347592,0.207322110030741,0.252320850875628,0,0,0,1.38134921352481,0,0,0.118306800039844,0,0,0.220587945464788,0,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0.882926198829301,0.614942192715568,0.171567810298526,0.219500570817251,0,0,0.185176890317059,0,0,0,0,0.117408694235822,0.144366447761074,0,0,0,0,0.246217006087397,0.234004265139238,0,0,0,0.141775097242386,0.268675568108545,0,0,0.492663237895943,0.088048434013226,0.207328115540772,0.288239906833923,0,0.190493682876507,0,0,0,0.102827492703324,0.300343057843917,0.285826432630578,0.112131084345361,0.43596006883328,0.22001485746285,0.258543431515556,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.602878754119172,0,0.199945982364114,0,0,2.10833939483032,0,0,0,0.289562613335158,0,0.179060963239896,0.112085143993527,0.394061520403854,0,0,0.508189248444927,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0,0,0.206768026122887,0,0.106727557803444,0,0,0,0,0.61384789315225,0,0.640695746278505,0,0.160853921143607,1.48418066444991,0,0,0.164254312027618,0,0.116210378459959,0.362578348774867,0,0.0920809889358963,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0.215915916102139,1.54227252690289,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,0.9273691048295,0.457847324091717,0.165018999841176,0,0,0,0.096670718292122,0,0,0,0.214840489736547,0.145016693914229,0.170453254832202,0.0890320356467374,0.330569830721956,0.192190067365106,0.382838137483752,0,0,0,0,0,0,0,0,0.143124886741991,0.372158369359667,0,0.190630193923825,0,0,0,0,0,0,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491245205065606,0,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0.229723400206959,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0.743212700502875,0,0.355709216742071,0.318852545457645,0,0,0,0.324621940274555,0,0,0.313359791546046,0,0.846458889008016,0.1605880751037,0.201799707191048,0,0.687010689511529,0,0.223676107892416,0.333698283423817,0.19538809540204,0,0,0.270455678475983,0.33307196799782,0,0.18714054040822,0,0,0.334330152832435,0,0,0.296964680832639,0,0,0.140669416410513,0.445234820091624,0,0,0,0.552567831062295,0.251932747854276,0.715880777515084,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0.174919999992391,0,0.1137934482855,0,0,0.344743373241465,0,0.347249989866585,0.885741385813839,0.120596438625408,0,0.110579259931225,0.295547618953547,0.219385397153973,0.10893846351899,0.278847488557207,0.615602068030377,0.227884111694002,0.23056390438806,0.269272933229316,0.217294743844016,0.31900115973192,0.183195186803725,0,0,0.156980256395025,0.498635045700469,0.451191321234361,0.588187602953219,0,0.37950746544837,0.158936578980379,0,0,0.282706142867882,0.216388639742091,0,0.0884575645033392,0,0.889563386041866,0.370691816839509,0.626531697032732,0.202203398942031,0,0,0.364909578431332,0,0.485560759068186,0,0,0.61214552326098,0.31593289814244,0.60129367765797,0,0,0,0.313932918407225,0,0,0.138674673013139,0,0.391969589657511,0,0,0,0.580537987734511,0,0.164230914106418,0.193978032976839,0,0,0,0,0.253243183823515,0,0.0801588202515337,0,0,0,0,0.343189995723929,0.14405479798815,0.124252535565433,0.235694034616795,0.407712618220842,0.209205692624666,0,0.288950589901519,0,0.136905378891993,0,0,0,0.279282401272254,0.229160424011684,0,0.1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| ||
|short_description=p3@GTF3C3 | |short_description=p3@GTF3C3 | ||
}} | }} |
Latest revision as of 07:26, 19 September 2015
Short description: | p3@GTF3C3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GTF3C3_5end |
Coexpression cluster: | NA |
Association with transcript: | 31bp_to_ENST00000409364_5end |
EntrezGene: | GTF3C3 |
HGNC: | 4666 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
perirenal preadipocyte | 4.22e-21 | 1 |
hepatocyte | 1.50e-15 | 12 |
hair follicle dermal papilla cell | 6.78e-08 | 3 |
stem cell of epidermis | 6.78e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
perirenal fat | 3.02e-11 | 2 |
liver | 4.58e-10 | 19 |
digestive gland | 4.58e-10 | 19 |
liver bud | 4.58e-10 | 19 |
hepatic diverticulum | 8.94e-09 | 22 |
liver primordium | 8.94e-09 | 22 |
digestive tract diverticulum | 2.03e-08 | 23 |
dermal papilla | 6.78e-08 | 3 |
papillary layer of dermis | 6.78e-08 | 3 |
epithelial sac | 8.61e-08 | 25 |
epithelium of foregut-midgut junction | 8.61e-08 | 25 |
anatomical boundary | 8.61e-08 | 25 |
hepatobiliary system | 8.61e-08 | 25 |
foregut-midgut junction | 8.61e-08 | 25 |
septum transversum | 8.61e-08 | 25 |
sac | 1.63e-07 | 26 |