FFCP PHASE1:Hg19::chr1:78353898..78353908,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=91624 | |EntrezGene=91624 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29557 | |HGNC=29557 | ||
|TSSclassifier=strong | |||
|UniProt=E7ETM8 | |UniProt=E7ETM8 | ||
|association_with_transcript=-289bp_to_ENST00000401035_5end | |association_with_transcript=-289bp_to_ENST00000401035_5end | ||
|cluster_id=chr1:78353898..78353908,+ | |||
|description=CAGE_peak_24_at_NEXN_5end | |description=CAGE_peak_24_at_NEXN_5end | ||
|id=chr1:78353898..78353908,+ | |id=chr1:78353898..78353908,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.08e-14!180;CL:0000057!5.47e-10!75;CL:0002620!1.69e-08!23;CL:0000515!1.87e-08!4;CL:0000188!2.94e-08!9;CL:0000680!2.52e-07!57;CL:0000056!2.52e-07!57;CL:0000355!2.52e-07!57 | |ontology_enrichment_celltype=CL:0000055!1.08e-14!180;CL:0000057!5.47e-10!75;CL:0002620!1.69e-08!23;CL:0000515!1.87e-08!4;CL:0000188!2.94e-08!9;CL:0000680!2.52e-07!57;CL:0000056!2.52e-07!57;CL:0000355!2.52e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0000228;3.99e-50;1!CL:0002372;3.99e-50;1!CL:0000056;1.13e-13;4!CL:0000737;1.13e-13;4!CL:1000306;1.13e-13;4!CL:0002547;1.13e-13;4!CL:0000680;2.18e-08;7!CL:0002570;1.49e-07;8!CL:0000188;8.37e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000228,2.42e-50,1;CL:0002372,2.42e-50,1;CL:0000737,1.00e-13,4;CL:0000515,1.00e-13,4;CL:1000306,1.29e-13,4;CL:0002547,1.29e-13,4;CL:0002570,1.49e-07,8;CL:0000188,7.91e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0004140;3.99e-50;1!CL:0000515;1.13e-13;4!UBERON:0004872;2.18e-08;7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000486!1.43e-07!82;UBERON:0007100!1.58e-07!27;UBERON:0001134!2.31e-07!61;UBERON:0002036!2.31e-07!61;UBERON:0003082!2.31e-07!61;UBERON:0000914!2.70e-07!83;UBERON:0002329!2.70e-07!83;UBERON:0003077!2.70e-07!83;UBERON:0003059!2.70e-07!83;UBERON:0007282!2.70e-07!83;UBERON:0009618!2.70e-07!83;UBERON:0007285!2.70e-07!83;UBERON:0004290!2.76e-07!70;UBERON:0002385!5.73e-07!63;UBERON:0001015!5.73e-07!63;UBERON:0000383!5.73e-07!63 | |ontology_enrichment_uberon=UBERON:0000486!1.43e-07!82;UBERON:0007100!1.58e-07!27;UBERON:0001134!2.31e-07!61;UBERON:0002036!2.31e-07!61;UBERON:0003082!2.31e-07!61;UBERON:0000914!2.70e-07!83;UBERON:0002329!2.70e-07!83;UBERON:0003077!2.70e-07!83;UBERON:0003059!2.70e-07!83;UBERON:0007282!2.70e-07!83;UBERON:0009618!2.70e-07!83;UBERON:0007285!2.70e-07!83;UBERON:0004290!2.76e-07!70;UBERON:0002385!5.73e-07!63;UBERON:0001015!5.73e-07!63;UBERON:0000383!5.73e-07!63 | ||
|ontology_enrichment_uberon_v019=UBERON:0004797;1.13e-13;4!UBERON:0000415;1.13e-13;4!UBERON:0007240;1.13e-13;4!UBERON:0005742;1.13e-13;4!UBERON:0005734;1.13e-13;4!UBERON:0004664;1.13e-13;4!UBERON:0004663;1.13e-13;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000415,1.29e-13,4;UBERON:0007240,1.29e-13,4;UBERON:0005742,1.29e-13,4;UBERON:0005734,1.29e-13,4;UBERON:0004664,1.29e-13,4;UBERON:0004663,1.29e-13,4;UBERON:0004797,2.35e-08,7 | |||
|phase1_expression=0.181678379270557,0,0.422863212287913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0.289693037921647,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,1.19168262731897,0,0.354668382198357,0.560677600142307,0,0.24666754841716,0.311211035399766,0,0,0,0,0,0.312160076830321,0,0.149448680551801,0,0,0,0.204154171254893,0,0.516628905878827,0,0,0,0,0.168336113954066,0.250237039743928,0,0,0,0,0,0.538168907066586,0,0.211931901159562,0,0,0.257640540045629,0.18611685633159,0.168776332241266,0.194874010322397,0.757301322732344,0.184099797284599,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,3.57656445851882,0,0.26593811658487,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0,0,1.42636905040718,0.579125226670317,0.205476322550383,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0,0,0.415941723061614,0.178428988797162,0.157702415033935,0,0.902838299183157,0,0,0,0.368738337083406,0,0,0,0,0,0,0,0,0,0.248107807818777,0.460385919864187,0,0.256278298511402,0,0.160853921143607,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0.256450125116389,0,0,0.206082023295445,0.27470839445503,0.247528499761764,0,0,0,0,0.154048617114644,0.15350367472613,0,0.107420244868274,0.435050081742686,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0.42793898803392,0,0,0.179872457583315,0.274537029736055,0,0,0,0,0,0.243713489631284,0,0.136499911407986,0,0,0,0,0,0.578775534266688,0,0,0,0,0.430234056612155,0.196498082026242,0,0.354761064070598,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0.313932918407225,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203996435272644,0,0,0,0,0.429765441419957,0,0.279282401272254,0.458320848023367,0,0.199679000498991,0,0.89268582976749,1.20930250476107,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0,0,0,0,0,0,0,0,0,0,0.544017803369474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0.149254802886874,0,0,0,0,0,0,0.151230923763239,0,0.147855149989634,0,0,0,0,0,0.521745061811734,0.300515217994437,0.380805212168795,0,0,0,0,0,0,0.686791410365586,0,0,0,0,0,0,0.231522474323834,0,0.179088841081487,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0.315543124386369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0.0620747142958579,0.224263725161227,0.0636471582781649,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |phase1_expression=0.181678379270557,0,0.422863212287913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0.289693037921647,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,1.19168262731897,0,0.354668382198357,0.560677600142307,0,0.24666754841716,0.311211035399766,0,0,0,0,0,0.312160076830321,0,0.149448680551801,0,0,0,0.204154171254893,0,0.516628905878827,0,0,0,0,0.168336113954066,0.250237039743928,0,0,0,0,0,0.538168907066586,0,0.211931901159562,0,0,0.257640540045629,0.18611685633159,0.168776332241266,0.194874010322397,0.757301322732344,0.184099797284599,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,3.57656445851882,0,0.26593811658487,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0,0,1.42636905040718,0.579125226670317,0.205476322550383,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0,0,0.415941723061614,0.178428988797162,0.157702415033935,0,0.902838299183157,0,0,0,0.368738337083406,0,0,0,0,0,0,0,0,0,0.248107807818777,0.460385919864187,0,0.256278298511402,0,0.160853921143607,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0.256450125116389,0,0,0.206082023295445,0.27470839445503,0.247528499761764,0,0,0,0,0.154048617114644,0.15350367472613,0,0.107420244868274,0.435050081742686,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0.42793898803392,0,0,0.179872457583315,0.274537029736055,0,0,0,0,0,0.243713489631284,0,0.136499911407986,0,0,0,0,0,0.578775534266688,0,0,0,0,0.430234056612155,0.196498082026242,0,0.354761064070598,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0.313932918407225,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203996435272644,0,0,0,0,0.429765441419957,0,0.279282401272254,0.458320848023367,0,0.199679000498991,0,0.89268582976749,1.20930250476107,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0,0,0,0,0,0,0,0,0,0,0.544017803369474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0.149254802886874,0,0,0,0,0,0,0.151230923763239,0,0.147855149989634,0,0,0,0,0,0.521745061811734,0.300515217994437,0.380805212168795,0,0,0,0,0,0,0.686791410365586,0,0,0,0,0,0,0.231522474323834,0,0.179088841081487,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0.315543124386369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0.0620747142958579,0.224263725161227,0.0636471582781649,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p24@NEXN | |short_description=p24@NEXN | ||
}} | }} |
Latest revision as of 07:35, 19 September 2015
Short description: | p24@NEXN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_24_at_NEXN_5end |
Coexpression cluster: | NA |
Association with transcript: | -289bp_to_ENST00000401035_5end |
EntrezGene: | NEXN |
HGNC: | 29557 |
UniProt: | E7ETM8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multinucleate cell | 2.42e-50 | 1 |
myotube | 2.42e-50 | 1 |
striated muscle cell | 1.00e-13 | 4 |
skeletal muscle myoblast | 1.00e-13 | 4 |
fibroblast of tunica adventitia of artery | 1.29e-13 | 4 |
fibroblast of the aortic adventitia | 1.29e-13 | 4 |
mesenchymal stem cell of adipose | 1.49e-07 | 8 |
cell of skeletal muscle | 7.91e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
artery wall | 1.29e-13 | 4 |
tunica adventitia of artery | 1.29e-13 | 4 |
adventitia | 1.29e-13 | 4 |
tunica adventitia of blood vessel | 1.29e-13 | 4 |
aorta tunica adventitia | 1.29e-13 | 4 |
aorta wall | 1.29e-13 | 4 |
blood vessel layer | 2.35e-08 | 7 |