FFCP PHASE1:Hg19::chr1:78353898..78353908,+: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr1:78353898..78353908,+ to FFCP PHASE1:Hg19::chr1:78353898..78353908,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=91624 | |EntrezGene=91624 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29557 | |HGNC=29557 | ||
|TSSclassifier=strong | |||
|UniProt=E7ETM8 | |UniProt=E7ETM8 | ||
|association_with_transcript=-289bp_to_ENST00000401035_5end | |||
|cluster_id=chr1:78353898..78353908,+ | |||
|description=CAGE_peak_24_at_NEXN_5end | |||
|id=chr1:78353898..78353908,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.08e-14!180;CL:0000057!5.47e-10!75;CL:0002620!1.69e-08!23;CL:0000515!1.87e-08!4;CL:0000188!2.94e-08!9;CL:0000680!2.52e-07!57;CL:0000056!2.52e-07!57;CL:0000355!2.52e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000228;3.99e-50;1!CL:0002372;3.99e-50;1!CL:0000056;1.13e-13;4!CL:0000737;1.13e-13;4!CL:1000306;1.13e-13;4!CL:0002547;1.13e-13;4!CL:0000680;2.18e-08;7!CL:0002570;1.49e-07;8!CL:0000188;8.37e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000228,2.42e-50,1;CL:0002372,2.42e-50,1;CL:0000737,1.00e-13,4;CL:0000515,1.00e-13,4;CL:1000306,1.29e-13,4;CL:0002547,1.29e-13,4;CL:0002570,1.49e-07,8;CL:0000188,7.91e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0004140;3.99e-50;1!CL:0000515;1.13e-13;4!UBERON:0004872;2.18e-08;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000486!1.43e-07!82;UBERON:0007100!1.58e-07!27;UBERON:0001134!2.31e-07!61;UBERON:0002036!2.31e-07!61;UBERON:0003082!2.31e-07!61;UBERON:0000914!2.70e-07!83;UBERON:0002329!2.70e-07!83;UBERON:0003077!2.70e-07!83;UBERON:0003059!2.70e-07!83;UBERON:0007282!2.70e-07!83;UBERON:0009618!2.70e-07!83;UBERON:0007285!2.70e-07!83;UBERON:0004290!2.76e-07!70;UBERON:0002385!5.73e-07!63;UBERON:0001015!5.73e-07!63;UBERON:0000383!5.73e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0004797;1.13e-13;4!UBERON:0000415;1.13e-13;4!UBERON:0007240;1.13e-13;4!UBERON:0005742;1.13e-13;4!UBERON:0005734;1.13e-13;4!UBERON:0004664;1.13e-13;4!UBERON:0004663;1.13e-13;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000415,1.29e-13,4;UBERON:0007240,1.29e-13,4;UBERON:0005742,1.29e-13,4;UBERON:0005734,1.29e-13,4;UBERON:0004664,1.29e-13,4;UBERON:0004663,1.29e-13,4;UBERON:0004797,2.35e-08,7 | |||
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| ||
|short_description=p24@NEXN | |||
}} | }} |
Latest revision as of 07:35, 19 September 2015
Short description: | p24@NEXN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_24_at_NEXN_5end |
Coexpression cluster: | NA |
Association with transcript: | -289bp_to_ENST00000401035_5end |
EntrezGene: | NEXN |
HGNC: | 29557 |
UniProt: | E7ETM8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multinucleate cell | 2.42e-50 | 1 |
myotube | 2.42e-50 | 1 |
striated muscle cell | 1.00e-13 | 4 |
skeletal muscle myoblast | 1.00e-13 | 4 |
fibroblast of tunica adventitia of artery | 1.29e-13 | 4 |
fibroblast of the aortic adventitia | 1.29e-13 | 4 |
mesenchymal stem cell of adipose | 1.49e-07 | 8 |
cell of skeletal muscle | 7.91e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
artery wall | 1.29e-13 | 4 |
tunica adventitia of artery | 1.29e-13 | 4 |
adventitia | 1.29e-13 | 4 |
tunica adventitia of blood vessel | 1.29e-13 | 4 |
aorta tunica adventitia | 1.29e-13 | 4 |
aorta wall | 1.29e-13 | 4 |
blood vessel layer | 2.35e-08 | 7 |