FFCP PHASE1:Hg19::chr8:86375821..86375832,+: Difference between revisions
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|id=chr8:86375821..86375832,+
|short_description=p8@CA2
|description=CAGE_peak_8_at_CA2_5end
|association_with_transcript=-248bp_to_ENST00000285379_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=760 | |EntrezGene=760 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1373 | |HGNC=1373 | ||
|TSSclassifier=strong | |||
|UniProt=P00918 | |UniProt=P00918 | ||
|association_with_transcript=-248bp_to_ENST00000285379_5end | |||
|cluster_id=chr8:86375821..86375832,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_8_at_CA2_5end | |||
|id=chr8:86375821..86375832,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.08e-27;10!UBERON:0005564;2.08e-27;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.79e-17!115;UBERON:0005743!6.27e-16!86;UBERON:0000955!4.54e-15!69;UBERON:0006238!4.54e-15!69;UBERON:0002298!5.56e-15!8;UBERON:0001017!1.57e-14!82;UBERON:0000073!3.42e-14!94;UBERON:0001016!3.42e-14!94;UBERON:0001049!2.05e-13!57;UBERON:0005068!2.05e-13!57;UBERON:0006241!2.05e-13!57;UBERON:0007135!2.05e-13!57;UBERON:0002616!6.64e-13!59;UBERON:0003075!7.12e-12!86;UBERON:0007284!7.12e-12!86;UBERON:0002346!3.00e-11!90;UBERON:0001896!7.30e-11!3;UBERON:0005290!7.30e-11!3;UBERON:0010096!7.30e-11!3;UBERON:0000988!9.35e-11!3;UBERON:0004733!4.77e-10!12;UBERON:0002028!4.77e-10!12;UBERON:0007277!4.77e-10!12;UBERON:0000153!8.47e-10!129;UBERON:0007811!8.47e-10!129;UBERON:0004732!2.76e-09!13;UBERON:0001301!4.52e-09!1;UBERON:0000033!6.93e-09!123;UBERON:0007190!1.65e-08!1;UBERON:0002022!2.22e-08!1;UBERON:0003076!4.59e-08!15;UBERON:0003057!4.59e-08!15;UBERON:0002780!8.71e-08!41;UBERON:0001890!8.71e-08!41;UBERON:0006240!8.71e-08!41;UBERON:0003080!1.38e-07!42;UBERON:0001869!1.67e-07!32;UBERON:0002020!4.52e-07!34;UBERON:0003528!4.52e-07!34;UBERON:0001893!4.78e-07!34;UBERON:0003135!6.52e-07!11;UBERON:0001872!7.48e-07!5;UBERON:0004121!8.50e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;6.50e-34;8!UBERON:0003135;4.86e-25;11!UBERON:0000991;1.02e-13;21!UBERON:0003101;3.77e-13;22!UBERON:0000079;3.77e-13;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.50e-34,8;UBERON:0003135,4.86e-25,11;UBERON:0000991,1.02e-13,21;UBERON:0009196,1.02e-13,21;UBERON:0009117,1.02e-13,21;UBERON:0005564,1.02e-13,21;UBERON:0004176,3.77e-13,22;UBERON:0003101,3.77e-13,22;UBERON:0000079,3.77e-13,22;UBERON:0002323,7.30e-07,46 | |||
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|short_description=p8@CA2 | |||
}} | }} |
Latest revision as of 07:53, 19 September 2015
Short description: | p8@CA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_CA2_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -248bp_to_ENST00000285379_5end |
EntrezGene: | CA2 |
HGNC: | 1373 |
UniProt: | P00918 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 6.50e-34 | 8 |
male reproductive organ | 4.86e-25 | 11 |
gonad | 1.02e-13 | 21 |
indifferent external genitalia | 1.02e-13 | 21 |
indifferent gonad | 1.02e-13 | 21 |
gonad primordium | 1.02e-13 | 21 |
external genitalia | 3.77e-13 | 22 |
male organism | 3.77e-13 | 22 |
male reproductive system | 3.77e-13 | 22 |
body cavity | 7.30e-07 | 46 |