FFCP PHASE1:Hg19::chr6:56258920..56258931,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=81578 | |EntrezGene=81578 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17025 | |HGNC=17025 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-28bp_to_ENST00000370819,uc003pcu.1_5end | |association_with_transcript=-28bp_to_ENST00000370819,uc003pcu.1_5end | ||
|cluster_id=chr6:56258920..56258931,- | |||
|coexpression_cluster_id=C83 | |||
|description=CAGE_peak_6_at_COL21A1_5end | |description=CAGE_peak_6_at_COL21A1_5end | ||
|id=chr6:56258920..56258931,- | |id=chr6:56258920..56258931,- | ||
|ontology_enrichment_celltype=CL:0000039!2.62e-21!7;CL:0000586!2.62e-21!7 | |ontology_enrichment_celltype=CL:0000039!2.62e-21!7;CL:0000586!2.62e-21!7 | ||
|ontology_enrichment_celltype_v019=CL:0000039;1.59e-12;7!CL:0000586;1.59e-12;7!CL:0001014;3.02e-11;2!CL:0001016;3.02e-11;2!CL:1000415;3.35e-11;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.59e-12,7;CL:0000586,1.59e-12,7;CL:0001014,3.02e-11,2;CL:0001016,3.02e-11,2;CL:1000415,3.35e-11,2 | |||
|ontology_enrichment_development_v019=UBERON:0003124;3.45e-21;1 | |||
|ontology_enrichment_disease=DOID:1799!8.14e-11!1;DOID:10165!8.14e-11!1;DOID:1798!8.14e-11!1;DOID:9119!1.57e-10!1;DOID:178!2.50e-10!1;DOID:326!2.50e-10!1;DOID:3978!2.50e-10!1;DOID:3394!2.50e-10!1;DOID:5844!2.50e-10!1;DOID:2355!4.33e-10!1;DOID:1287!8.19e-10!4;DOID:3095!6.66e-07!22;DOID:2994!6.66e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:1799;2.30e-21;1!DOID:10165;2.30e-21;1!DOID:1798;2.30e-21;1!DOID:9119;8.53e-21;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,2.30e-21,1;DOID:10165,2.30e-21,1;DOID:1798,2.30e-21,1;DOID:9119,9.43e-21,1 | |||
|ontology_enrichment_uberon=UBERON:0000473!1.55e-10!8;UBERON:0003135!8.41e-08!11 | |ontology_enrichment_uberon=UBERON:0000473!1.55e-10!8;UBERON:0003135!8.41e-08!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0002110;6.78e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002110,6.78e-08,3;UBERON:0006242,6.78e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88514832613622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.23647103495506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.66457574398256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.3727064545075,20.9135311474769,0.54323685961004,0,0,0,0,0.156980256395025,0,0,0,0,0.37950746544837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.08433595110488,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0.203996435272644,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,9.31967596219631,0,0,0,0,0.0846733320657845,0,0,0,0,0,6.52424285499351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.785801251664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.80580857431222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0.0757786982182394,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88514832613622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.23647103495506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.66457574398256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.3727064545075,20.9135311474769,0.54323685961004,0,0,0,0,0.156980256395025,0,0,0,0,0.37950746544837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.08433595110488,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0.203996435272644,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,9.31967596219631,0,0,0,0,0.0846733320657845,0,0,0,0,0,6.52424285499351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.785801251664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.80580857431222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0.0757786982182394,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p6@COL21A1 | |short_description=p6@COL21A1 | ||
}} | }} |
Latest revision as of 08:47, 19 September 2015
Short description: | p6@COL21A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_COL21A1_5end |
Coexpression cluster: | C83_choriocarcinoma_pancreatic_placenta_chorionic_HES3GFP_testicular_amniotic |
Association with transcript: | -28bp_to_ENST00000370819, uc003pcu.1_5end |
EntrezGene: | COL21A1 |
HGNC: | 17025 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.59e-12 | 7 |
germ cell | 1.59e-12 | 7 |
CD1a-positive Langerhans cell | 3.02e-11 | 2 |
immature CD1a-positive Langerhans cell | 3.02e-11 | 2 |
epithelial cell of gall bladder | 3.35e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
gallbladder | 6.78e-08 | 3 |
gall bladder primordium | 6.78e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 2.30e-21 | 1 |
endocrine pancreas cancer | 2.30e-21 | 1 |
pancreatic endocrine carcinoma | 2.30e-21 | 1 |
acute myeloid leukemia | 9.43e-21 | 1 |