FFCP PHASE1:Hg19::chr6:56483961..56483984,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=667 | |EntrezGene=667 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=1090 | |HGNC=1090 | ||
|TSSclassifier=strong | |||
|UniProt=Q03001 | |UniProt=Q03001 | ||
|association_with_transcript=64bp_to_X58677_5end | |association_with_transcript=64bp_to_X58677_5end | ||
|cluster_id=chr6:56483961..56483984,- | |||
|coexpression_cluster_id=C457 | |||
|description=CAGE_peak_33_at_DST_5end | |description=CAGE_peak_33_at_DST_5end | ||
|id=chr6:56483961..56483984,- | |id=chr6:56483961..56483984,- | ||
|ontology_enrichment_celltype=CL:0002076!1.07e-14!43;CL:0000223!2.08e-13!59;CL:0002251!1.60e-10!21;CL:0000066!5.16e-09!254;CL:0002368!4.40e-07!13 | |ontology_enrichment_celltype=CL:0002076!1.07e-14!43;CL:0000223!2.08e-13!59;CL:0002251!1.60e-10!21;CL:0000066!5.16e-09!254;CL:0002368!4.40e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0002076;1.14e-18;42!CL:0002623;4.78e-16;3!CL:0002251;1.81e-11;20!CL:0000622;8.23e-10;5!CL:0002368;1.38e-09;13!CL:0000150;4.60e-09;9!CL:0000154;3.05e-08;6!CL:0000240;5.23e-08;6!CL:0000311;5.23e-08;6!CL:0000079;5.23e-08;6!CL:0000237;5.23e-08;6!CL:0002231;9.39e-08;3!CL:0002166;2.57e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.10e-23,42;CL:0000223,3.33e-16,58;CL:0002623,4.02e-16,3;CL:0000066,5.37e-14,253;CL:0002251,1.70e-11,20;CL:0000622,7.44e-10,5;CL:0002368,1.36e-09,13;CL:0000150,4.91e-09,9;CL:0000154,2.80e-08,6;CL:0000240,5.50e-08,6;CL:0000311,5.50e-08,6;CL:0000079,5.50e-08,6;CL:0000237,5.50e-08,6;CL:0000036,5.50e-08,6;CL:0000357,5.50e-08,6;CL:0000114,5.50e-08,6;CL:0002231,8.80e-08,3;CL:0002166,2.19e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000357;5.23e-08;6!CL:0000114;5.23e-08;6!CL:0000223;8.48e-08;58 | |||
|ontology_enrichment_disease=DOID:305!1.46e-08!106;DOID:1749!8.04e-08!14;DOID:0050687!1.23e-07!143;DOID:14566!8.62e-07!239 | |ontology_enrichment_disease=DOID:305!1.46e-08!106;DOID:1749!8.04e-08!14;DOID:0050687!1.23e-07!143;DOID:14566!8.62e-07!239 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001004!1.84e-09!72;UBERON:0004119!2.21e-08!169;UBERON:0000925!2.21e-08!169;UBERON:0006595!2.21e-08!169;UBERON:0005153!6.93e-07!37 | |ontology_enrichment_uberon=UBERON:0001004!1.84e-09!72;UBERON:0004119!2.21e-08!169;UBERON:0000925!2.21e-08!169;UBERON:0006595!2.21e-08!169;UBERON:0005153!6.93e-07!37 | ||
|ontology_enrichment_uberon_v019=UBERON:0001044;3.05e-08;6!UBERON:0003293;3.05e-08;6!UBERON:0003294;3.05e-08;6!UBERON:0010047;3.05e-08;6!UBERON:0003408;3.05e-08;6!UBERON:0000167;3.05e-08;6!UBERON:0000165;7.78e-08;28 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001004,5.66e-10,74;UBERON:0004119,1.05e-09,160;UBERON:0000925,1.05e-09,160;UBERON:0006595,1.05e-09,160;UBERON:0001044,2.80e-08,6;UBERON:0003293,2.80e-08,6;UBERON:0003294,2.80e-08,6;UBERON:0010047,2.80e-08,6;UBERON:0000167,2.80e-08,6;UBERON:0003102,7.55e-08,99;UBERON:0000161,1.11e-07,36;UBERON:0000166,1.31e-07,22;UBERON:0000165,1.44e-07,29;UBERON:0000930,1.44e-07,29;UBERON:0005153,3.95e-07,37 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0,0.410623275218653,0.251085279189606,0.0764134057479513,0,0.0787107813136792,0,0,0,2.75826367343678,0.30120591877825,0.369754010166788,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0.605399502633369,0,0,0,0.212604299965044,0.209658645508376,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0.132409180813219,0,0.354668382198357,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,1.4351170855109,0.213557388818567,0,0.600182192168805,0,0.515281080091258,0,0.675105328965065,0,0.757301322732344,0,0.161646056818812,0.355009592516614,0.10075209822764,0,1.54608682530637,0.818238361772504,0.286804595389004,0,0.132529768321485,0.116193942869518,0,0,0.36497735907583,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0.217879444092406,0,0,0,0.38474715694639,0,0,0,0,0,0,0.590789906681404,0,0,0,1.20725313949488,0,3.9206299240536,5.09236448371913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51183915378974,2.26840155587818,2.14940454486836,2.03443756959773,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0.239624855491583,0,0,0.144781306667579,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0.535286966391485,0.473107245101804,0,0,0,0,0,0,0.347534457872331,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0.177561725313127,0,0,0,0,2.40607764363942,10.5893137276281,0,0.182091168006717,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0.27470839445503,0.247528499761764,0,0,0,0.193341436584244,0,0,0,0,0.145016693914229,0.0852266274161009,0,3.63626813794152,3.2672311452068,3.70076866234294,4.4509423576442,0,0,0,0,0,0,0,0.143124886741991,0,0,0.190630193923825,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0.243713489631284,0,0,0.141405431953713,0,0,0.66343897524122,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0.577332676353072,0,0,0,0,1.68471475667626,0.443430153536676,1.37834040124176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0.121360521749513,0,0.284136146806413,0.47748896947538,0,1.84296421259539,0,0.140669416410513,0,0,0,0,0,0.503865495708552,0.20453736500431,0.492339221844278,0,0.0898683511473268,0,0,0,0,0,0,0.0927680981618513,0,0.260427761085233,0,0,1.0241410345695,0.762760950878299,1.18193840883968,0,0,0.173624994933292,0,0.361789315876224,0,0.331737779793674,0.295547618953547,0,0,2.78847488557207,0.153900517007594,0,0,0.179515288819544,0.217294743844016,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0.802577647298789,0.234264445725339,0,0.19566461893209,0.485560759068186,0.394584402849391,0,0,0.063186579628488,0,0,0,0,0,0,0,2.08012009519708,0,0.0979923974143777,0.261177619741208,0,0.343972064943233,0,0,0,0.193978032976839,0,0.451961481561065,0.137041924646751,0.19871461170299,0,0.391102765469606,0.0801588202515337,0,0.19980960958213,0.432271251462318,0.114536596165916,0.171594997861965,0.14405479798815,0.248505071130865,1.41416420770077,0.407712618220842,0.418411385249333,0.203996435272644,0,0.600420288709789,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0.688992370603241,0.0846733320657845,0,0.544813624446302,0,0,0,0.2249738915515,0,0,1.0063040627978,0,0,0.105600336519406,1.25501137532991,0.575745591958336,0,0,0,0,0.864221491201268,0,0,0.164185041498678,1.02232813071253,0,0,0,0.517131825446202,0.66116300871345,0,0,0.106787412567695,0,0.414239055347196,0.496166021811951,0,0,0.638341257770182,0,0,0,0,0.157054096250234,0,0.122026264901963,0.3755727921195,0,0,0,1.38348634936231,0.249960815924213,0,0,0,0,0,0,0,0,0.189403005275089,0.50313580350515,0,0,0.453692771289717,0,0,0,0,0,0.414706207840855,0,0,0,0.380805212168795,0,0.181848659202559,0.214821114084977,0,0.398095888698616,0.800055529326307,0.343395705182793,0,0,0.192619830407303,1.07220795687463,0,0,0.231522474323834,0.489473409012935,0.179088841081487,0,0,0.353378291891762,0.192914038270915,0.168942440653073,0,0.345430341731199,0,0.691292180758654,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0.699397538597222,0,0,0.107824811396682,0,0,0,0,0,0,0,0.0788617450012534,0,0,0.3062454773532,0,0,0.159633859057151,0,0.252071696221718,0,0.161475645631851,0,0.490738592505128,0.11796972334774,10.4554301157357,0.462102664601353,0,0,0,0,0,0,0,2.12903492763126,0,0,0,0.413373593002368,0,1.09394961803644,0,0.496211178389294,0,2.04419884223352,0,0.336283722218824,0,0,0.0887023701626388,0.115233987555779,0.171488009437418,0,0,0,0,0.078493092850514,0,0.280272163313789,0,0.215927591218621,1.9110067515482,0,0.316027223465453,0.23248285073625,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| ||
|short_description=p33@DST | |short_description=p33@DST | ||
}} | }} |
Latest revision as of 09:02, 19 September 2015
Short description: | p33@DST |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_33_at_DST_5end |
Coexpression cluster: | C457_salivary_Prostate_oral_Small_Keratinocyte_Urothelial_Mammary |
Association with transcript: | 64bp_to_X58677_5end |
EntrezGene: | DST |
HGNC: | 1090 |
UniProt: | Q03001 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.10e-23 | 42 |
endodermal cell | 3.33e-16 | 58 |
acinar cell of salivary gland | 4.02e-16 | 3 |
epithelial cell | 5.37e-14 | 253 |
epithelial cell of alimentary canal | 1.70e-11 | 20 |
acinar cell | 7.44e-10 | 5 |
respiratory epithelial cell | 1.36e-09 | 13 |
glandular epithelial cell | 4.91e-09 | 9 |
protein secreting cell | 2.80e-08 | 6 |
stratified squamous epithelial cell | 5.50e-08 | 6 |
keratin accumulating cell | 5.50e-08 | 6 |
stratified epithelial cell | 5.50e-08 | 6 |
keratinizing barrier epithelial cell | 5.50e-08 | 6 |
epithelial fate stem cell | 5.50e-08 | 6 |
stratified epithelial stem cell | 5.50e-08 | 6 |
surface ectodermal cell | 5.50e-08 | 6 |
epithelial cell of prostate | 8.80e-08 | 3 |
epithelial cell of Malassez | 2.19e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
respiratory system | 5.66e-10 | 74 |
endoderm-derived structure | 1.05e-09 | 160 |
endoderm | 1.05e-09 | 160 |
presumptive endoderm | 1.05e-09 | 160 |
saliva-secreting gland | 2.80e-08 | 6 |
gland of oral region | 2.80e-08 | 6 |
gland of foregut | 2.80e-08 | 6 |
oral gland | 2.80e-08 | 6 |
oral cavity | 2.80e-08 | 6 |
surface structure | 7.55e-08 | 99 |
orifice | 1.11e-07 | 36 |
oral opening | 1.31e-07 | 22 |
mouth | 1.44e-07 | 29 |
stomodeum | 1.44e-07 | 29 |
epithelial bud | 3.95e-07 | 37 |