FFCP PHASE1:Hg19::chr8:9008160..9008180,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79660 | |EntrezGene=79660 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14942 | |HGNC=14942 | ||
|TSSclassifier=strong | |||
|UniProt=Q86XI6 | |UniProt=Q86XI6 | ||
|association_with_transcript=25bp_to_ENST00000310455_5end | |association_with_transcript=25bp_to_ENST00000310455_5end | ||
|cluster_id=chr8:9008160..9008180,- | |||
|coexpression_cluster_id=C2930 | |coexpression_cluster_id=C2930 | ||
|description=CAGE_peak_1_at_PPP1R3B_5end | |description=CAGE_peak_1_at_PPP1R3B_5end | ||
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|ontology_enrichment_celltype=CL:0002139!4.50e-10!24;CL:0000071!2.74e-07!18;CL:0002546!2.74e-07!18 | |ontology_enrichment_celltype=CL:0002139!4.50e-10!24;CL:0000071!2.74e-07!18;CL:0002546!2.74e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0002139;3.78e-10;24!CL:0000860;4.57e-10;33!CL:0002057;4.57e-10;33!CL:0000071;2.36e-07;18!CL:0000473;5.48e-07;39!CL:0000234;5.48e-07;39 | |ontology_enrichment_celltype_v019=CL:0002139;3.78e-10;24!CL:0000860;4.57e-10;33!CL:0002057;4.57e-10;33!CL:0000071;2.36e-07;18!CL:0000473;5.48e-07;39!CL:0000234;5.48e-07;39 | ||
|ontology_enrichment_celltype_v019_2=CL:0002139,4.32e-10,24;CL:0000071,2.67e-07,18;CL:0002546,2.67e-07,18;CL:0000115,3.94e-07,36;CL:0002078,9.76e-07,45 | |||
|ontology_enrichment_development_v019=CL:0002546;2.36e-07;18 | |ontology_enrichment_development_v019=CL:0002546;2.36e-07;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001009!3.75e-13!113;UBERON:0004535!4.89e-12!110;UBERON:0000468!5.52e-12!659;UBERON:0003081!9.74e-12!216;UBERON:0000055!3.96e-09!69;UBERON:0003914!6.68e-09!118;UBERON:0002049!6.99e-09!79;UBERON:0007798!6.99e-09!79;UBERON:0004872!1.12e-08!84;UBERON:0000926!3.46e-08!448;UBERON:0004120!3.46e-08!448;UBERON:0006603!3.46e-08!448;UBERON:0001981!4.55e-08!60;UBERON:0007500!4.55e-08!60;UBERON:0004537!4.55e-08!60;UBERON:0006965!4.55e-08!60;UBERON:0001986!2.74e-07!18;UBERON:0004638!2.74e-07!18;UBERON:0004852!2.74e-07!18;UBERON:0000467!5.23e-07!625;UBERON:0000480!7.22e-07!626 | |ontology_enrichment_uberon=UBERON:0001009!3.75e-13!113;UBERON:0004535!4.89e-12!110;UBERON:0000468!5.52e-12!659;UBERON:0003081!9.74e-12!216;UBERON:0000055!3.96e-09!69;UBERON:0003914!6.68e-09!118;UBERON:0002049!6.99e-09!79;UBERON:0007798!6.99e-09!79;UBERON:0004872!1.12e-08!84;UBERON:0000926!3.46e-08!448;UBERON:0004120!3.46e-08!448;UBERON:0006603!3.46e-08!448;UBERON:0001981!4.55e-08!60;UBERON:0007500!4.55e-08!60;UBERON:0004537!4.55e-08!60;UBERON:0006965!4.55e-08!60;UBERON:0001986!2.74e-07!18;UBERON:0004638!2.74e-07!18;UBERON:0004852!2.74e-07!18;UBERON:0000467!5.23e-07!625;UBERON:0000480!7.22e-07!626 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.36e-07;18!UBERON:0001986;2.36e-07;18!UBERON:0004852;2.36e-07;18 | |ontology_enrichment_uberon_v019=UBERON:0004638;2.36e-07;18!UBERON:0001986;2.36e-07;18!UBERON:0004852;2.36e-07;18 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001009,3.82e-13,112;UBERON:0003081,2.22e-12,203;UBERON:0000926,4.64e-12,315;UBERON:0004120,4.64e-12,315;UBERON:0006603,4.64e-12,315;UBERON:0004535,5.03e-12,109;UBERON:0003914,3.46e-09,117;UBERON:0000055,4.49e-09,68;UBERON:0002049,7.21e-09,78;UBERON:0007798,7.21e-09,78;UBERON:0004872,1.09e-08,83;UBERON:0007500,4.57e-08,59;UBERON:0001981,4.57e-08,59;UBERON:0004537,4.57e-08,59;UBERON:0006965,4.57e-08,59;UBERON:0000922,7.16e-08,592;UBERON:0004638,2.67e-07,18;UBERON:0001986,2.67e-07,18;UBERON:0004852,2.67e-07,18;UBERON:0005423,3.86e-07,581;UBERON:0002050,7.88e-07,564 | |||
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| ||
|short_description=p1@PPP1R3B | |short_description=p1@PPP1R3B | ||
}} | }} |
Latest revision as of 09:19, 19 September 2015
Short description: | p1@PPP1R3B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PPP1R3B_5end |
Coexpression cluster: | C2930_Eosinophils_Neutrophils_CD14_Whole_aorta_bladder_colon |
Association with transcript: | 25bp_to_ENST00000310455_5end |
EntrezGene: | PPP1R3B |
HGNC: | 14942 |
UniProt: | Q86XI6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 4.32e-10 | 24 |
blood vessel endothelial cell | 2.67e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.67e-07 | 18 |
endothelial cell | 3.94e-07 | 36 |
meso-epithelial cell | 9.76e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
circulatory system | 3.82e-13 | 112 |
lateral plate mesoderm | 2.22e-12 | 203 |
mesoderm | 4.64e-12 | 315 |
mesoderm-derived structure | 4.64e-12 | 315 |
presumptive mesoderm | 4.64e-12 | 315 |
cardiovascular system | 5.03e-12 | 109 |
epithelial tube | 3.46e-09 | 117 |
vessel | 4.49e-09 | 68 |
vasculature | 7.21e-09 | 78 |
vascular system | 7.21e-09 | 78 |
splanchnic layer of lateral plate mesoderm | 1.09e-08 | 83 |
epithelial tube open at both ends | 4.57e-08 | 59 |
blood vessel | 4.57e-08 | 59 |
blood vasculature | 4.57e-08 | 59 |
vascular cord | 4.57e-08 | 59 |
embryo | 7.16e-08 | 592 |
blood vessel endothelium | 2.67e-07 | 18 |
endothelium | 2.67e-07 | 18 |
cardiovascular system endothelium | 2.67e-07 | 18 |
developing anatomical structure | 3.86e-07 | 581 |
embryonic structure | 7.88e-07 | 564 |