FFCP PHASE1:Hg19::chr12:56360642..56360664,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1017 | |EntrezGene=1017 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1771 | |HGNC=1771 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=24bp_to_ENST00000554619_5end | |association_with_transcript=24bp_to_ENST00000554619_5end | ||
|cluster_id=chr12:56360642..56360664,+ | |||
|coexpression_cluster_id=C58 | |coexpression_cluster_id=C58 | ||
|description=CAGE_peak_4_at_CDK2_5end | |description=CAGE_peak_4_at_CDK2_5end | ||
|id=chr12:56360642..56360664,+ | |id=chr12:56360642..56360664,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.05e-09!254;CL:0000548!1.21e-09!679;CL:0000004!1.21e-09!679;CL:0000255!1.21e-09!679;CL:0002321!3.16e-09!248;CL:0000220!3.72e-09!246;CL:0000012!4.98e-09!682;CL:0000148!9.53e-07!10;CL:0000541!9.53e-07!10 | |ontology_enrichment_celltype=CL:0000066!1.05e-09!254;CL:0000548!1.21e-09!679;CL:0000004!1.21e-09!679;CL:0000255!1.21e-09!679;CL:0002321!3.16e-09!248;CL:0000220!3.72e-09!246;CL:0000012!4.98e-09!682;CL:0000148!9.53e-07!10;CL:0000541!9.53e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0000148;5.83e-10;10!CL:0000453;6.66e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.06e-09,10;CL:0000541,1.06e-09,10;CL:0000453,6.94e-09,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!2.61e-09!235;DOID:14566!4.42e-09!239 | |ontology_enrichment_disease=DOID:162!2.61e-09!235;DOID:14566!4.42e-09!239 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!8.07e-07!9 | |ontology_enrichment_uberon=UBERON:0001737!8.07e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;5.81e-12;9!UBERON:0001557;5.81e-12;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.10e-12,9;UBERON:0001557,5.75e-07,19 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0.491467873003018,2.09340350391728,2.83973783769224,1.31883489114227,0.123766352960047,0,0,0,0.730310090387373,0,3.0780264519197,2.04000691244253,0,2.57612388417951,1.09499540058307,2.51085279189606,0.305653622991805,0.410502947249729,0.236132343941038,0,0,0,2.75826367343678,0.30120591877825,0.739508020333575,0.697204805222715,0.426507697462265,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0.309706370895104,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.616804496998528,0.167186495390678,0,0,0,0,0,0,0,0.128091319725675,0.260118695119756,0.328875809207352,0.829050053357545,0.289803085735052,0.14828656316206,0.267540828089713,1.04535523804977,0,0,0,0,0.318565414324097,0,0,0,0.127986611154418,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0.12786256184353,2.1686349143074,0.50133791063589,0,0,0,0.850813354476611,0.886917589850256,0.351339142772504,0.327447688744282,0.728590576585084,0.741568885568859,0,0,0.132957960518865,0,0,0.371457501329565,0.79504962946682,0,0,0.56530794192401,0,0,1.04497483268405,0.516833518338658,0,0.66944122552934,0,0.760272105718513,0,0.367663080345869,0,0.446498641420399,0.44905874525234,0,0,0,0,1.31780417436063,0,0.436094052142534,0,1.01304409331664,0.132409180813219,0,1.06400514659507,0,0,0.49333509683432,0.311211035399766,0.67355336034844,1.30769522490767,0.756787138224657,0,0.937285727335186,0.312160076830321,1.1409436430889,0.149448680551801,0.587172493218824,0.323745888736263,0.561803226808994,0,0.368502951935304,0.309977343527296,0,0.247266929278557,0.910161361938026,0,0.336672227908132,0.625592599359821,0.277064115484183,0.438977620880838,0,0.751190294532984,1.24775401476023,0.717558542755448,0,0,1.20036438433761,0.515262646192195,0.257640540045629,0.37223371266318,2.36286865137773,1.16924406193438,0.504867548488229,0.276149695926898,0,0,1.20902517873168,1.18692414617341,0.193260853163297,0.818238361772504,0.286804595389004,0.731842236777572,0.132529768321485,0.464775771478074,0.829288440122964,1.00928340350251,0.36497735907583,0,0,1.38134921352481,0,0,2.48444280083672,2.69735504124963,2.16909926895134,3.41911315470421,1.96091499683166,1.42362371466658,3.50561401216427,3.13954344200554,1.92373578473195,0,2.80483547606892,2.057870056657,0,0,0.982827216677626,1.18157981336281,2.20731549707325,0.491953754172454,0.686271241194102,0.548751427043128,1.1240175325762,0.804231779293047,0.277765335475589,0,0,2.88662684050547,0.579652024875384,0.234817388471643,0.288732895522148,0.462985512576611,0.380508304469197,0.790204397959275,0.858486162094873,0,0,0,0,1.34385702559088,0.850650583454319,0.447792613514241,0.290633938513962,1.15014803749563,0,0.176096868026452,0.414656231081544,0.144119953416961,0.12624243342638,47.5599228248346,25.5932245124046,82.0522130470329,51.3217338068116,37.4292073440098,92.2053187580827,57.7369393913768,1.34557301214433,0.43596006883328,1.0267360014933,0,0,1.690605505112,0,0,0.771622122786426,5.67396528093113,1.3321108950805,0.285955987316295,0,1.64648067356154,0.65147236858747,0,0,0.301439377059586,0,0.399891964728228,0,0.502257091432126,0,0,0,0,1.01346914667305,0.61642896765115,0.537182889719687,0.336255431980582,0,0,0.128343036279748,0.508189248444927,1.30139853857622,0,1.00509759200609,0.637938751653163,0.749007023947182,0,0,0,0,0.542530047399471,0.207970861530807,0.535286966391485,0.315404830067869,0.35142424497814,0,0,1.03473071292505,0,1.10621501125022,0.695068915744663,0.195801157462741,0.343143423810856,0,0,0.106727557803444,2.72814814301633,0,1.20956117331872,0.248107807818777,0.767309866440312,0,0.256278298511402,0.511707249066704,0,0,1.07946785661859,0.177561725313127,0.410635780069046,1.03850885836724,1.04589340613963,0.483437798366489,0.40101294060657,0,1.95184561879831,1.45672934405374,0.393373244878272,0.902399225814824,0.462092022626489,1.56869953835371,0,0.105551628892876,1.13733384070897,0.850468526382578,0.431831832204279,3.08454505380579,0,0.501689773854853,0.254876273045038,0.831076008928724,0.671624264166535,0.219259876645935,0.522870902049801,0,0,0,1.13345112812495,1.09883357782012,0.577566499444116,0.574265537996172,0,1.6068392984416,0.096670718292122,0.770243085573222,0.767518373630648,0.689182862422653,0,0.145016693914229,1.10794615640931,0.0890320356467374,0,0.192190067365106,0.638063562472921,0.10115778085555,0,0.31481234683064,2.7881490806424,0.308033580176089,0.532306030317022,1.73986598415015,0.55597265731176,0.572499546967965,0.372158369359667,0.316379424718726,0.762520775695299,1.02359116524534,0,0,0.78494864019923,1.61885211824983,0.54907405947211,0.942499218765491,1.01091240786658,0,4.21258456238981,0.48763373908959,1.21856744815642,2.11300293513511,1.50149902548784,0.141405431953713,0,0.551365343546124,0,0.438450885253763,0.578775534266688,1.31178950409327,0.405820753925408,0,0.281695602532241,0.286822704408103,0.196498082026242,1.78335525740625,0.709522128141196,0,0,0.75894634753143,0.69986944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| ||
|short_description=p4@CDK2 | |short_description=p4@CDK2 | ||
}} | }} |
Latest revision as of 09:19, 19 September 2015
Short description: | p4@CDK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CDK2_5end |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | 24bp_to_ENST00000554619_5end |
EntrezGene: | CDK2 |
HGNC: | 1771 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.06e-09 | 10 |
melanoblast | 1.06e-09 | 10 |
Langerhans cell | 6.94e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.10e-12 | 9 |
upper respiratory tract | 5.75e-07 | 19 |