FFCP PHASE2:Hg19::chr18:3412005..3412009,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:7050 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:11776 |TSSclas...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=7050 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=11776 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=A6NE42,Q15583 | ||
|association_with_transcript=-62bp_to_ENST00000401449,NM_174886,uc002klu.2_5end | |association_with_transcript=-62bp_to_ENST00000401449,NM_174886,uc002klu.2_5end | ||
|cluster_id=chr18:3412005..3412009,+ | |cluster_id=chr18:3412005..3412009,+ |
Latest revision as of 09:33, 19 September 2015
Short description: | p49@TGIF1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_49_at_TGIF1_5end |
Coexpression cluster: | C136_Wilms_extraskeletal_anaplastic_rhabdomyosarcoma_cholangiocellular_nonsmall_neuroectodermal |
Association with transcript: | -62bp_to_ENST00000401449, NM_174886, uc002klu.2_5end |
EntrezGene: | TGIF1 |
HGNC: | 11776 |
UniProt: | A6NE42Q15583 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p49@TGIF1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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epithelial cell of gall bladder | 6.96e-21 | 2 |
chorionic membrane mesenchymal stem cell | 1.60e-14 | 3 |
epithelial cell of lung | 2.17e-09 | 19 |
Showing 1 to 3 of 3 entries
Ontology term | p-value | n |
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egg chorion | 1.60e-14 | 3 |
gallbladder | 2.09e-14 | 3 |
gall bladder primordium | 2.09e-14 | 3 |
respiratory tract epithelium | 2.17e-09 | 19 |
lung epithelium | 2.17e-09 | 19 |
lung | 3.04e-08 | 22 |
respiratory tube | 3.04e-08 | 22 |
respiration organ | 3.04e-08 | 22 |
pair of lungs | 3.04e-08 | 22 |
lung primordium | 3.04e-08 | 22 |
Showing 1 to 10 of 13 entries
Ontology term | p-value | n |
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lung cancer | 1.27e-11 | 15 |
respiratory system cancer | 5.84e-11 | 16 |
bronchus cancer | 6.04e-07 | 7 |
bronchogenic carcinoma | 6.04e-07 | 7 |
Showing 1 to 4 of 4 entries