FFCP PHASE1:Hg19::chr4:94749897..94749909,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=474 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=797 | |||
|TSSclassifier=strong | |||
|UniProt=Q92858 | |||
|association_with_transcript=-132bp_to_ENST00000306011_5end | |||
|cluster_id=chr4:94749897..94749909,+ | |||
|coexpression_cluster_id=C150 | |||
|description=CAGE_peak_1_at_ATOH1_5end | |||
|id=chr4:94749897..94749909,+ | |||
|ontology_enrichment_celltype=CL:0002274!1.73e-31!5;CL:0000457!1.73e-31!5;CL:0002191!1.73e-31!5;CL:0000097!1.73e-31!5;CL:0000831!1.73e-31!5;CL:0002028!1.73e-31!5;CL:0002322!1.26e-20!5;CL:0000163!1.85e-17!9;CL:0000242!7.36e-15!2;CL:0000946!1.87e-07!1;CL:0000786!1.87e-07!1;CL:0000980!1.87e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0000123;3.35e-32;2!CL:0000242;3.35e-32;2!CL:0000312;1.63e-13;5!CL:0000240;2.02e-11;6!CL:0000311;2.02e-11;6!CL:0000079;2.02e-11;6!CL:0000237;2.02e-11;6!CL:0000362;6.55e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,3.35e-32,2;CL:0000312,1.63e-13,5;CL:0000240,2.02e-11,6;CL:0000311,2.02e-11,6;CL:0000079,2.02e-11,6;CL:0000237,2.02e-11,6;CL:0000036,2.02e-11,6;CL:0000357,2.02e-11,6;CL:0000114,2.02e-11,6;CL:0000362,6.55e-08,9 | |||
|ontology_enrichment_development_v019=UBERON:0001045;1.93e-16;1!UBERON:0006242;2.84e-16;1!CL:0000357;2.02e-11;6!CL:0000114;2.02e-11;6 | |||
|ontology_enrichment_disease=DOID:8552!7.45e-08!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!7.03e-18!27;UBERON:0000059!3.98e-15!11;UBERON:0005409!1.40e-13!35;UBERON:0001155!3.07e-12!9;UBERON:0001154!4.99e-08!1;UBERON:0001153!4.99e-08!1;UBERON:0002370!3.90e-07!4;UBERON:0005058!3.90e-07!4;UBERON:0009113!3.90e-07!4;UBERON:0003295!3.90e-07!4;UBERON:0005562!3.90e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;5.63e-41;17!UBERON:0005409;5.10e-32;22!UBERON:0002108;4.83e-28;4!UBERON:0001155;1.85e-27;9!UBERON:0000059;1.50e-22;11!UBERON:0004921;1.69e-19;33!UBERON:0001154;1.93e-16;1!UBERON:0001153;1.93e-16;1!UBERON:0009854;1.93e-16;1!UBERON:0001555;3.40e-08;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.63e-41,17;UBERON:0005409,2.71e-28,25;UBERON:0002108,4.83e-28,4;UBERON:0001155,1.85e-27,9;UBERON:0000059,1.50e-22,11;UBERON:0001154,1.93e-16,1;UBERON:0001153,1.93e-16,1;UBERON:0001045,1.93e-16,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0,0.232387885739037,0.932949495138334,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491953754172454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0.088048434013226,1.4512968087854,0.432359860250884,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.24939439509181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.5110096198684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664846727600626,0,0,0,0,0,0,0,0,0,22.8910244148056,16.8069372556344,15.2757536233406,0,0,0,0,0,0,0,0,0,0,3.62972148145992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.92107695265417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.550157746388935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,345.162825579672,183.325101192694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.914196847253,13.7692523117493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.87734892670021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129177819672012,0.186224142887574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p1@ATOH1 | |||
}} |
Latest revision as of 09:49, 19 September 2015
Short description: | p1@ATOH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ATOH1_5end |
Coexpression cluster: | C150_merkel_carcinoid_nonsmall_gastrointestinal_argyrophil_pineal_small |
Association with transcript: | -132bp_to_ENST00000306011_5end |
EntrezGene: | ATOH1 |
HGNC: | 797 |
UniProt: | Q92858 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 3.35e-32 | 2 |
keratinocyte | 1.63e-13 | 5 |
stratified squamous epithelial cell | 2.02e-11 | 6 |
keratin accumulating cell | 2.02e-11 | 6 |
stratified epithelial cell | 2.02e-11 | 6 |
keratinizing barrier epithelial cell | 2.02e-11 | 6 |
epithelial fate stem cell | 2.02e-11 | 6 |
stratified epithelial stem cell | 2.02e-11 | 6 |
surface ectodermal cell | 2.02e-11 | 6 |
epidermal cell | 6.55e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 5.63e-41 | 17 |
gastrointestinal system | 2.71e-28 | 25 |
small intestine | 4.83e-28 | 4 |
colon | 1.85e-27 | 9 |
large intestine | 1.50e-22 | 11 |
vermiform appendix | 1.93e-16 | 1 |
caecum | 1.93e-16 | 1 |
midgut | 1.93e-16 | 1 |