FFCP PHASE1:Hg19::chr19:50435704..50435718,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22809 | |EntrezGene=22809 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=790 | |HGNC=790 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y2D1 | |UniProt=Q9Y2D1 | ||
|association_with_transcript=-271bp_to_AF101388_5end | |association_with_transcript=-271bp_to_AF101388_5end | ||
|cluster_id=chr19:50435704..50435718,+ | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_11_at_ATF5_5end | |description=CAGE_peak_11_at_ATF5_5end | ||
|id=chr19:50435704..50435718,+ | |id=chr19:50435704..50435718,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002617;1.26e-21;2!CL:0000785;1.07e-11;1!CL:0000819;1.07e-11;1!CL:0000569;2.63e-11;4!CL:0000182;9.75e-09;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002617,2.63e-21,2;CL:0000819,6.26e-12,1;CL:0000569,3.59e-11,4;CL:0000011,3.59e-11,4;CL:0000182,9.76e-09,12 | |||
|ontology_enrichment_development_v019=CL:0000011;2.63e-11;4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060073;1.07e-11;1!DOID:8675;1.07e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,6.26e-12,1;DOID:8675,6.26e-12,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.74e-14;19!UBERON:0006925;3.74e-14;19!UBERON:0002423;9.89e-11;25!UBERON:0002365;1.26e-08;31!UBERON:0002330;1.26e-08;31!UBERON:0002368;1.63e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.64e-14,19;UBERON:0006925,3.64e-14,19;UBERON:0008836,3.64e-14,19;UBERON:0008835,3.21e-12,22;UBERON:0003894,3.21e-12,22;UBERON:0009854,1.10e-11,23;UBERON:0007499,9.70e-11,25;UBERON:0009497,9.70e-11,25;UBERON:0000015,9.70e-11,25;UBERON:0002423,9.70e-11,25;UBERON:0006235,9.70e-11,25;UBERON:0004161,9.70e-11,25;UBERON:0009856,2.54e-10,26;UBERON:0002365,1.24e-08,31;UBERON:0002330,1.24e-08,31;UBERON:0002368,1.25e-07,35;UBERON:0005172,9.08e-07,54;UBERON:0005173,9.08e-07,54 | |||
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|phase1_expression=1.09007027562334,1.07050261945492,0.563817616383885,0,0.893922188854576,0.872338524100369,0,0.631719873426831,0,0,0,0,0,0,0.331397375727916,1.34465029290355,0,0,0,0,0,0,0,0,0.125542639594803,0.458480434487708,0.821005894499457,0.236132343941038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0.232429036905685,0.411167888021826,0.309706370895104,0,0,0.236482229888585,0,0,0,0.376484679085209,0.272906150057846,0,0.612167784741805,0,0.639337125799041,0,0,0,0.290209238628584,0.56738522469114,0.622822248995575,0,0.521482918420201,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0.289693037921647,0,0,0,0.221729397462564,0.087834785693126,0.261958150995425,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0.417989933073621,0,0,0.66944122552934,0,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0.496971951695318,0.25326102332916,0,0.860509862246441,0.709336764396714,0.560677600142307,0,0.24666754841716,0.311211035399766,0.134710672069688,0,0,0,0,0,0,0.298897361103602,0.117434498643765,0,0.140450806702248,0,0,0.103325781175765,0,0,0,0,0,0,0.277064115484183,0,0,0.150238058906597,0,0,0,0,0,0.103052529238439,0,0,0,0.584622030967192,0,0.0920498986422993,0.161646056818812,0,0,0,0,0,0,0.121973706129595,0,0.348581828608555,0.207322110030741,0,0,0,0.643240938192885,0,0,0,0,0,0,0.441175890929576,0,0,0.134831308160164,0,0,0,0,0,0,7.60530208930985,13.7595810334868,7.68026878685825,0,0,0,0,0,0,0,0.325808305310325,0,0,0.115930404975077,0.234817388471643,0,0.925971025153221,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0.871533458600294,0.199945982364114,0,0,2.10833939483032,0,0,0,0.144781306667579,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0.117141414992713,0,0,2.0694614258501,0,0,0,0,0.343143423810856,0,0,0.320182673410333,0,0,0,0.496215615637554,0,0.280660094433074,0,0.511707249066704,0.64341568457443,0,0,0.355123450626254,0.0821271560138091,0,0.232420756919918,0.241718899183244,0.200506470303285,0.0920809889358963,0,0,0.262248829918848,0.451199612907412,0,0,0,0,0,0,0.215915916102139,1.54227252690289,0,0.501689773854853,0,0,0,0,0,0,0,0,1.13345112812495,0,0,0,0,0,0.580024309752732,0,0,0.137836572484531,0.214840489736547,0,0,0.178064071293475,0,0.192190067365106,0,0,0.929691098594572,0.62962469366128,0,0,0,0,0,0,0,0,0,0,0.855877976067841,0,0,0,0.274537029736055,0,0,0,0,0,0.243713489631284,0,0,0.848432591722276,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,1.26664581178598,0,0,0,0,0,0,0.941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0.371606350251437,0.28853842595289,0.355709216742071,0,0,0,0.423347165447766,0,0,0,0.313359791546046,0,0,0.1605880751037,0,0.425846237690326,0,0,0.223676107892416,0,0,0.278406173895242,0,0.270455678475983,0,0,0,0.146508179271894,0.242721043499027,0,0.568272293612826,0,0,0,0.994147647766298,0,0,0.16480387422676,0,0.19924798825107,0,0.251932747854276,0.102268682502155,0.246169610922139,0,0,0,0,0.197286811273867,0,0,0,0.185536196323703,0,0.260427761085233,0,0,0,0,0,1.37897349296586,0.291604613383254,0.694499979733169,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0.0915975934018623,0.533034776018635,0,0,0,0.225595660617181,0,0.503464760927528,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,1.64209310294099,0,0.485560759068186,0,0,0,0,0,0,0,0,0.313932918407225,0,0,0.138674673013139,0,0,0.0870592065804026,0,0.343972064943233,0.290268993867255,0.0730893170861856,0.0821154570532092,0,0.441280633457501,0.225980740780532,0,0,0,0,0,0,0,0.288180834308212,0,4.11827994868715,0,0.49701014226173,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0.458320848023367,0,0.399358000997982,0,0,0,0,0,0.0787831823072236,0.164831716762333,0.202210631562555,0.492137407573744,0.254019996197353,0,0,0.160753148465019,0,0,0,0,0,0,0.0788057072991982,0.104909176269996,0,0,0,0,0,0,0.542999601753713,0,0,0,0.082092520749339,0,0.226624183040251,6.59485051551371,2.65013777824443,0,0.13223260174269,0,0,0.106787412567695,0,0,0.496166021811951,0.395223263795889,0,0,0,0.5013797880454,0,0,0,0,0,0.250381861413,0,0,0.0620964029413835,0.968440444553616,0.124980407962107,0.151649117541648,0,0,0,0,0.149254802886874,0.233713309847224,0.554805861502613,0,0.251567901752575,0,1.14420034198462,1.05861646634267,0,0,0,0,0,0,0,0,0,0,0,0,0.214821114084977,0,0,0,0.686791410365586,0,0,0.385239660814607,0,0,0,0,0,0,0.308801447160972,0,0.176689145945881,0,0.168942440653073,0.256241518587947,0.345430341731199,0,0,0.194860308839388,0.132864840313363,0.327130788511688,0,0,0,0,0.106691729694141,0,0,0.184105950251841,0,0,0.255788742607303,0,0.471797825567689,0,0,0.212574920101683,1.61116493536703,0,0.318004350653419,0.47317047000752,0,0,0,0,0,0.159633859057151,0,0.252071696221718,0,0,0,0.0981477185010256,0,0.183428598521679,0.115525666150338,0,0,0,0.0752103283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| ||
|short_description=p11@ATF5 | |short_description=p11@ATF5 | ||
}} | }} |
Latest revision as of 10:09, 19 September 2015
Short description: | p11@ATF5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_ATF5_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -271bp_to_AF101388_5end |
EntrezGene: | ATF5 |
HGNC: | 790 |
UniProt: | Q9Y2D1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of breast | 2.63e-21 | 2 |
B-1 B cell | 6.26e-12 | 1 |
cardiac mesenchymal cell | 3.59e-11 | 4 |
migratory trunk neural crest cell | 3.59e-11 | 4 |
hepatocyte | 9.76e-09 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 3.64e-14 | 19 |
digestive gland | 3.64e-14 | 19 |
liver bud | 3.64e-14 | 19 |
hepatic diverticulum | 3.21e-12 | 22 |
liver primordium | 3.21e-12 | 22 |
digestive tract diverticulum | 1.10e-11 | 23 |
epithelial sac | 9.70e-11 | 25 |
epithelium of foregut-midgut junction | 9.70e-11 | 25 |
anatomical boundary | 9.70e-11 | 25 |
hepatobiliary system | 9.70e-11 | 25 |
foregut-midgut junction | 9.70e-11 | 25 |
septum transversum | 9.70e-11 | 25 |
sac | 2.54e-10 | 26 |
exocrine gland | 1.24e-08 | 31 |
exocrine system | 1.24e-08 | 31 |
endocrine gland | 1.25e-07 | 35 |
abdomen element | 9.08e-07 | 54 |
abdominal segment element | 9.08e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 6.26e-12 | 1 |
lymphosarcoma | 6.26e-12 | 1 |