FFCP PHASE1:Hg19::chr15:81592487..81592496,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3603 | |EntrezGene=3603 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=5980 | |HGNC=5980 | ||
|TSSclassifier=strong | |||
|UniProt=Q14005 | |UniProt=Q14005 | ||
|association_with_transcript=-2bp_to_S81601_5end | |association_with_transcript=-2bp_to_S81601_5end | ||
|cluster_id=chr15:81592487..81592496,+ | |||
|coexpression_cluster_id=C3518 | |coexpression_cluster_id=C3518 | ||
|description=CAGE_peak_17_at_IL16_5end | |description=CAGE_peak_17_at_IL16_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000945!1.11e-22!24;CL:0000826!1.11e-22!24;CL:0000838!1.28e-18!52;CL:0000542!3.43e-18!53;CL:0000051!3.43e-18!53;CL:0002087!1.66e-13!119;CL:0000738!4.75e-13!140;CL:0002031!1.53e-11!124;CL:0000037!1.71e-10!172;CL:0000566!1.71e-10!172;CL:0000988!1.40e-09!182;CL:0002032!3.45e-09!165;CL:0000837!3.45e-09!165;CL:0000236!3.27e-07!14 | |ontology_enrichment_celltype=CL:0000945!1.11e-22!24;CL:0000826!1.11e-22!24;CL:0000838!1.28e-18!52;CL:0000542!3.43e-18!53;CL:0000051!3.43e-18!53;CL:0002087!1.66e-13!119;CL:0000738!4.75e-13!140;CL:0002031!1.53e-11!124;CL:0000037!1.71e-10!172;CL:0000566!1.71e-10!172;CL:0000988!1.40e-09!182;CL:0002032!3.45e-09!165;CL:0000837!3.45e-09!165;CL:0000236!3.27e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000945;6.92e-33;24!CL:0000946;1.33e-23;1!CL:0000786;1.33e-23;1 | |ontology_enrichment_celltype_v019=CL:0000945;6.92e-33;24!CL:0000946;1.33e-23;1!CL:0000786;1.33e-23;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000945,6.19e-33,24;CL:0000826,6.19e-33,24;CL:0000946,1.34e-23,1;CL:0000786,1.34e-23,1;CL:0000980,1.34e-23,1;CL:0000838,2.83e-15,52;CL:0000542,5.47e-15,53;CL:0000051,5.47e-15,53;CL:0000785,1.65e-12,2;CL:0000955,1.65e-12,2;CL:0000818,1.65e-12,2;CL:0000954,1.65e-12,2;CL:0000816,1.65e-12,2;CL:0000817,8.96e-09,3;CL:0002087,8.01e-07,115 | |||
|ontology_enrichment_development_v019=CL:0000954;1.65e-12;2 | |ontology_enrichment_development_v019=CL:0000954;1.65e-12;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:630;3.67e-23;1!DOID:0050177;3.67e-23;1!DOID:0050427;3.67e-23;1 | |ontology_enrichment_disease_v019=DOID:630;3.67e-23;1!DOID:0050177;3.67e-23;1!DOID:0050427;3.67e-23;1 | ||
|ontology_enrichment_disease_v019_2=DOID:630,2.62e-23,1;DOID:0050177,2.62e-23,1;DOID:0050427,2.62e-23,1 | |||
|ontology_enrichment_uberon=UBERON:0004177!4.27e-13!7;UBERON:0002370!5.83e-09!4;UBERON:0005058!5.83e-09!4;UBERON:0009113!5.83e-09!4;UBERON:0003295!5.83e-09!4;UBERON:0005562!5.83e-09!4 | |ontology_enrichment_uberon=UBERON:0004177!4.27e-13!7;UBERON:0002370!5.83e-09!4;UBERON:0005058!5.83e-09!4;UBERON:0009113!5.83e-09!4;UBERON:0003295!5.83e-09!4;UBERON:0005562!5.83e-09!4 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p17@IL16 | |short_description=p17@IL16 | ||
}} | }} |
Latest revision as of 10:36, 19 September 2015
Short description: | p17@IL16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_IL16_5end |
Coexpression cluster: | C3518_lymphangiectasia_lymphoma_plasma_B_CD4_xeroderma_Dendritic |
Association with transcript: | -2bp_to_S81601_5end |
EntrezGene: | IL16 |
HGNC: | 5980 |
UniProt: | Q14005 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 6.19e-33 | 24 |
pro-B cell | 6.19e-33 | 24 |
antibody secreting cell | 1.34e-23 | 1 |
plasma cell | 1.34e-23 | 1 |
plasmablast | 1.34e-23 | 1 |
lymphoid lineage restricted progenitor cell | 2.83e-15 | 52 |
lymphocyte | 5.47e-15 | 53 |
common lymphoid progenitor | 5.47e-15 | 53 |
mature B cell | 1.65e-12 | 2 |
pre-B-II cell | 1.65e-12 | 2 |
transitional stage B cell | 1.65e-12 | 2 |
small pre-B-II cell | 1.65e-12 | 2 |
immature B cell | 1.65e-12 | 2 |
precursor B cell | 8.96e-09 | 3 |
nongranular leukocyte | 8.01e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 2.62e-23 | 1 |
monogenic disease | 2.62e-23 | 1 |
xeroderma pigmentosum | 2.62e-23 | 1 |