FFCP PHASE1:Hg19::chr6:100061760..100061774,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=59336 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=13998 | |||
|TSSclassifier=strong | |||
|UniProt=Q7Z5E7 | |||
|association_with_transcript=-233bp_to_AY130010_5end | |||
|cluster_id=chr6:100061760..100061774,+ | |||
|description=CAGE_peak_2_at_PRDM13_5end | |||
|id=chr6:100061760..100061774,+ | |||
|ontology_enrichment_celltype=CL:0000082!1.87e-10!19;CL:0000242!2.96e-08!2;CL:0000039!8.33e-08!7;CL:0000586!8.33e-08!7 | |||
|ontology_enrichment_celltype_v019=CL:0002127;8.84e-13;1!CL:0000911;8.84e-13;1!CL:0000814;8.84e-13;1!CL:0000946;2.75e-12;1!CL:0002553;2.75e-12;1!CL:0000786;2.75e-12;1!CL:0002535;6.07e-07;2!CL:0000123;9.01e-07;2!CL:0000242;9.01e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,9.92e-13,1;CL:0000914,9.92e-13,1;CL:0000911,9.92e-13,1;CL:0000814,9.92e-13,1;CL:0002042,9.92e-13,1;CL:0002039,9.92e-13,1;CL:0002040,9.92e-13,1;CL:0002041,9.92e-13,1;CL:0002553,1.96e-12,1;CL:0000946,3.08e-12,1;CL:0000786,3.08e-12,1;CL:0000980,3.08e-12,1;CL:0000893,5.41e-07,2;CL:0002489,5.41e-07,2;CL:0000809,5.41e-07,2;CL:0000808,5.41e-07,2;CL:0000894,5.41e-07,2;CL:0000806,5.41e-07,2;CL:0000807,5.41e-07,2;CL:0000805,5.41e-07,2;CL:0002425,5.41e-07,2;CL:0002535,6.07e-07,2;CL:0000242,8.52e-07,2;CL:0000785,9.54e-07,2;CL:0000955,9.54e-07,2;CL:0000818,9.54e-07,2;CL:0000954,9.54e-07,2;CL:0000816,9.54e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002425;5.11e-07;2!CL:0000954;9.01e-07;2 | |||
|ontology_enrichment_disease=DOID:162!1.66e-19!235;DOID:14566!6.97e-19!239;DOID:1325!4.18e-17!7;DOID:3904!4.18e-17!7;DOID:0050687!4.16e-15!143;DOID:5409!1.28e-13!4;DOID:1324!1.32e-13!15;DOID:3905!5.46e-13!9;DOID:0050615!1.14e-12!16;DOID:305!2.10e-11!106;DOID:0050686!7.22e-08!137 | |||
|ontology_enrichment_disease_v019=DOID:4362;4.55e-10;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,4.55e-10,5;DOID:0050686,2.90e-08,137;DOID:162,2.97e-07,235;DOID:14566,4.65e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0004802!1.87e-10!19;UBERON:0000115!1.87e-10!19;UBERON:0002048!7.59e-09!22;UBERON:0000117!7.59e-09!22;UBERON:0000171!7.59e-09!22;UBERON:0000170!7.59e-09!22;UBERON:0005597!7.59e-09!22;UBERON:0000118!7.59e-09!22;UBERON:0004807!1.49e-08!28 | |||
|ontology_enrichment_uberon_v019=UBERON:0000002;1.55e-08;6!UBERON:0001560;1.55e-08;6!UBERON:0006955;6.07e-07;2!UBERON:0004801;6.07e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000002,1.55e-08,6;UBERON:0001560,1.55e-08,6;UBERON:0006955,6.07e-07,2;UBERON:0004801,6.07e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.25046917581229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19040304263846,1.32015199872941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.478278818186467,0,0,0,1.62310970137278,0,0,0,0,0,0,0,0,0,0,0.447352215784832,0.166849141711909,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0,0,3.95529298144223,0,0,0,2.26739473068848,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82069517256799,0.254253650292766,2.36387681767936,0.344743373241465,1.16641845353302,0.173624994933292,0,0,0,0,0,0,0,0,0,0.455768223388005,0,0,0.108647371922008,0,0,0,0,3.92450640987562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.751617097072463,0.207376382794494,0,0.992975867626496,0.313932918407225,1.19472429772959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0,0.717149357331379,0,0,0,0,0,0,0,0,1.06720276974141,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21357815897969,0,0.454947352624943,0,0,0.468334905806882,1.44921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521988583930423,0,0,0,0,0,0,0,0,0,0,0,0.607719912354764,0,0,0,0,0,0,0,0,0.213383459388282,0,0,0,0,0,0,0,0.314531883711793,0,0,0,0,0,0,0,1.60114149657094,0,0,0,0,0,0,0,0,0,0,0,0.471878893390961,0,0,0,0,0.397832444232549,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26757386311357,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0.464965701472501,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.08242605001475,0,0.118920090777569,0.79062257427272,0.439762066981716,0.150962843566674,0,0,0,0,0.235676547101626,0,0,0.4226557275834,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0.827054095813604,0.50141507858475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49418284228802,0,0,0,0,0,0,0,0 | |||
|short_description=p2@PRDM13 | |||
}} |
Latest revision as of 11:43, 19 September 2015
Short description: | p2@PRDM13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PRDM13_5end |
Coexpression cluster: | NA |
Association with transcript: | -233bp_to_AY130010_5end |
EntrezGene: | PRDM13 |
HGNC: | 13998 |
UniProt: | Q7Z5E7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 9.92e-13 | 1 |
immature NK T cell | 9.92e-13 | 1 |
effector T cell | 9.92e-13 | 1 |
mature NK T cell | 9.92e-13 | 1 |
immature NK T cell stage IV | 9.92e-13 | 1 |
immature NK T cell stage I | 9.92e-13 | 1 |
immature NK T cell stage II | 9.92e-13 | 1 |
immature NK T cell stage III | 9.92e-13 | 1 |
lung fibroblast | 1.96e-12 | 1 |
antibody secreting cell | 3.08e-12 | 1 |
plasma cell | 3.08e-12 | 1 |
plasmablast | 3.08e-12 | 1 |
thymocyte | 5.41e-07 | 2 |
double negative thymocyte | 5.41e-07 | 2 |
double-positive, alpha-beta thymocyte | 5.41e-07 | 2 |
DN4 thymocyte | 5.41e-07 | 2 |
DN1 thymic pro-T cell | 5.41e-07 | 2 |
DN2 thymocyte | 5.41e-07 | 2 |
DN3 thymocyte | 5.41e-07 | 2 |
immature single positive thymocyte | 5.41e-07 | 2 |
early T lineage precursor | 5.41e-07 | 2 |
epithelial cell of cervix | 6.07e-07 | 2 |
Merkel cell | 8.52e-07 | 2 |
mature B cell | 9.54e-07 | 2 |
pre-B-II cell | 9.54e-07 | 2 |
transitional stage B cell | 9.54e-07 | 2 |
small pre-B-II cell | 9.54e-07 | 2 |
immature B cell | 9.54e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
uterine cervix | 1.55e-08 | 6 |
neck of organ | 1.55e-08 | 6 |
uterine epithelium | 6.07e-07 | 2 |
cervix epithelium | 6.07e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 4.55e-10 | 5 |
organ system cancer | 2.90e-08 | 137 |
cancer | 2.97e-07 | 235 |
disease of cellular proliferation | 4.65e-07 | 239 |