FFCP PHASE1:Hg19::chr4:99579931..99579942,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10098 | |EntrezGene=10098 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17753 | |HGNC=17753 | ||
|TSSclassifier=strong | |||
|UniProt=P62079 | |UniProt=P62079 | ||
|association_with_transcript=-119bp_to_NM_005723_5end | |association_with_transcript=-119bp_to_NM_005723_5end | ||
|cluster_id=chr4:99579931..99579942,- | |||
|coexpression_cluster_id=C14 | |coexpression_cluster_id=C14 | ||
|description=CAGE_peak_6_at_TSPAN5_5end | |description=CAGE_peak_6_at_TSPAN5_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000764;1.07e-28;2!CL:0000558;1.07e-28;2 | |ontology_enrichment_celltype_v019=CL:0000764;1.07e-28;2!CL:0000558;1.07e-28;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000764,9.30e-29,2;CL:0000765,9.30e-29,2;CL:0000050,9.30e-29,2;CL:0000038,9.30e-29,2;CL:0000558,9.30e-29,2;CL:0000547,9.30e-29,2;CL:0000549,9.30e-29,2;CL:0000550,9.30e-29,2;CL:0000552,9.30e-29,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.15e-16!82;UBERON:0000955!7.77e-16!69;UBERON:0006238!7.77e-16!69;UBERON:0005743!1.29e-14!86;UBERON:0002616!1.59e-14!59;UBERON:0007023!2.57e-14!115;UBERON:0000073!4.05e-13!94;UBERON:0001016!4.05e-13!94;UBERON:0001049!6.92e-13!57;UBERON:0005068!6.92e-13!57;UBERON:0006241!6.92e-13!57;UBERON:0007135!6.92e-13!57;UBERON:0000033!2.18e-12!123;UBERON:0000153!7.58e-12!129;UBERON:0007811!7.58e-12!129;UBERON:0001893!2.47e-10!34;UBERON:0001869!4.33e-10!32;UBERON:0002780!6.89e-10!41;UBERON:0001890!6.89e-10!41;UBERON:0006240!6.89e-10!41;UBERON:0003080!1.60e-09!42;UBERON:0002791!1.83e-09!33;UBERON:0002020!3.10e-09!34;UBERON:0003528!3.10e-09!34;UBERON:0004121!9.02e-09!169;UBERON:0003075!1.74e-08!86;UBERON:0007284!1.74e-08!86;UBERON:0000178!2.44e-08!15;UBERON:0000179!2.44e-08!15;UBERON:0000463!2.44e-08!15;UBERON:0000956!2.45e-08!25;UBERON:0000203!2.45e-08!25;UBERON:0000924!2.81e-08!173;UBERON:0006601!2.81e-08!173;UBERON:0002346!9.52e-08!90 | |ontology_enrichment_uberon=UBERON:0001017!7.15e-16!82;UBERON:0000955!7.77e-16!69;UBERON:0006238!7.77e-16!69;UBERON:0005743!1.29e-14!86;UBERON:0002616!1.59e-14!59;UBERON:0007023!2.57e-14!115;UBERON:0000073!4.05e-13!94;UBERON:0001016!4.05e-13!94;UBERON:0001049!6.92e-13!57;UBERON:0005068!6.92e-13!57;UBERON:0006241!6.92e-13!57;UBERON:0007135!6.92e-13!57;UBERON:0000033!2.18e-12!123;UBERON:0000153!7.58e-12!129;UBERON:0007811!7.58e-12!129;UBERON:0001893!2.47e-10!34;UBERON:0001869!4.33e-10!32;UBERON:0002780!6.89e-10!41;UBERON:0001890!6.89e-10!41;UBERON:0006240!6.89e-10!41;UBERON:0003080!1.60e-09!42;UBERON:0002791!1.83e-09!33;UBERON:0002020!3.10e-09!34;UBERON:0003528!3.10e-09!34;UBERON:0004121!9.02e-09!169;UBERON:0003075!1.74e-08!86;UBERON:0007284!1.74e-08!86;UBERON:0000178!2.44e-08!15;UBERON:0000179!2.44e-08!15;UBERON:0000463!2.44e-08!15;UBERON:0000956!2.45e-08!25;UBERON:0000203!2.45e-08!25;UBERON:0000924!2.81e-08!173;UBERON:0006601!2.81e-08!173;UBERON:0002346!9.52e-08!90 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.30e-76;15!UBERON:0000179;4.30e-76;15!UBERON:0000463;4.30e-76;15!UBERON:0002390;2.54e-32;32!UBERON:0002193;5.69e-18;42 | |ontology_enrichment_uberon_v019=UBERON:0000178;4.30e-76;15!UBERON:0000179;4.30e-76;15!UBERON:0000463;4.30e-76;15!UBERON:0002390;2.54e-32;32!UBERON:0002193;5.69e-18;42 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.30e-76,15;UBERON:0000179,4.30e-76,15;UBERON:0000463,4.30e-76,15;UBERON:0007023,9.17e-17,114;UBERON:0002390,7.25e-11,98;UBERON:0003061,7.25e-11,98;UBERON:0004535,8.76e-10,109;UBERON:0002193,8.76e-10,108;UBERON:0001009,1.70e-09,112 | |||
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| ||
|short_description=p6@TSPAN5 | |short_description=p6@TSPAN5 | ||
}} | }} |
Latest revision as of 11:43, 19 September 2015
Short description: | p6@TSPAN5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_TSPAN5_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | -119bp_to_NM_005723_5end |
EntrezGene: | TSPAN5 |
HGNC: | 17753 |
UniProt: | P62079 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 9.30e-29 | 2 |
erythroblast | 9.30e-29 | 2 |
megakaryocyte-erythroid progenitor cell | 9.30e-29 | 2 |
erythroid progenitor cell | 9.30e-29 | 2 |
reticulocyte | 9.30e-29 | 2 |
proerythroblast | 9.30e-29 | 2 |
basophilic erythroblast | 9.30e-29 | 2 |
polychromatophilic erythroblast | 9.30e-29 | 2 |
orthochromatic erythroblast | 9.30e-29 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 4.30e-76 | 15 |
haemolymphatic fluid | 4.30e-76 | 15 |
organism substance | 4.30e-76 | 15 |
adult organism | 9.17e-17 | 114 |
hematopoietic system | 7.25e-11 | 98 |
blood island | 7.25e-11 | 98 |
cardiovascular system | 8.76e-10 | 109 |
hemolymphoid system | 8.76e-10 | 108 |
circulatory system | 1.70e-09 | 112 |