FFCP PHASE1:Hg19::chr3:109035256..109035277,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=151871 | |EntrezGene=151871 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19197 | |HGNC=19197 | ||
|TSSclassifier=strong | |||
|UniProt=Q7Z7J5 | |UniProt=Q7Z7J5 | ||
|association_with_transcript=86bp_to_ENST00000478945,NM_138815,uc003dxo.2_5end | |association_with_transcript=86bp_to_ENST00000478945,NM_138815,uc003dxo.2_5end | ||
|cluster_id=chr3:109035256..109035277,- | |||
|coexpression_cluster_id=C112 | |coexpression_cluster_id=C112 | ||
|description=CAGE_peak_2_at_DPPA2_5end | |description=CAGE_peak_2_at_DPPA2_5end | ||
|id=chr3:109035256..109035277,- | |id=chr3:109035256..109035277,- | ||
|ontology_enrichment_celltype=CL:0000039!1.98e-38!7;CL:0000586!1.98e-38!7;CL:0002322!2.38e-37!5;CL:0000148!2.58e-07!10;CL:0000541!2.58e-07!10 | |ontology_enrichment_celltype=CL:0000039!1.98e-38!7;CL:0000586!1.98e-38!7;CL:0002322!2.38e-37!5;CL:0000148!2.58e-07!10;CL:0000541!2.58e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0000039;2.51e-41;7!CL:0000586;2.51e-41;7!CL:0002322;2.90e-15;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,2.79e-41,7;CL:0000586,2.79e-41,7;CL:0002322,3.35e-15,5 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.56e-08;10!UBERON:0005564;3.56e-08;10 | |||
|ontology_enrichment_disease=DOID:3095!5.50e-16!22;DOID:2994!5.50e-16!22 | |ontology_enrichment_disease=DOID:3095!5.50e-16!22;DOID:2994!5.50e-16!22 | ||
|ontology_enrichment_disease_v019=DOID:3095;1.81e-13;22!DOID:2994;1.81e-13;22!DOID:4074;2.85e-10;2!DOID:4905;2.85e-10;2!DOID:3498;2.85e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.87e-13,22;DOID:2994,1.87e-13,22;DOID:4074,2.49e-10,2;DOID:4905,2.49e-10,2;DOID:3498,2.49e-10,2;DOID:0050687,1.34e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0000473!2.16e-23!8;UBERON:0003135!5.53e-17!11;UBERON:0000991!8.22e-09!21;UBERON:0009196!8.22e-09!21;UBERON:0009117!8.22e-09!21;UBERON:0005564!8.22e-09!21;UBERON:0004176!2.11e-08!22;UBERON:0003101!2.11e-08!22;UBERON:0000079!2.11e-08!22;UBERON:0003133!8.17e-07!48 | |ontology_enrichment_uberon=UBERON:0000473!2.16e-23!8;UBERON:0003135!5.53e-17!11;UBERON:0000991!8.22e-09!21;UBERON:0009196!8.22e-09!21;UBERON:0009117!8.22e-09!21;UBERON:0005564!8.22e-09!21;UBERON:0004176!2.11e-08!22;UBERON:0003101!2.11e-08!22;UBERON:0000079!2.11e-08!22;UBERON:0003133!8.17e-07!48 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;5.41e-10;8!UBERON:0003135;1.64e-07;11!UBERON:0002369;1.93e-07;3!UBERON:0001235;1.93e-07;3!UBERON:0006858;1.93e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,5.06e-10,8;UBERON:0003135,1.56e-07,11;UBERON:0002369,1.93e-07,3;UBERON:0001235,1.93e-07,3;UBERON:0006858,1.93e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21973706129595,0.662648841607426,0.929551542956147,0.829288440122964,1.26160425437814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71528151186722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.2672071321687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0.435753854075961,0,0,0,1.1528195219403,2.69272933229316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36965233252463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,33.6737592727792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443511850813194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.37840181555137,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.437062287854782,0,0.509944148709909,1.3360870263278,0.459474497674225,2.75778293221613,0.909344378618873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21973706129595,0.662648841607426,0.929551542956147,0.829288440122964,1.26160425437814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71528151186722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.2672071321687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0.435753854075961,0,0,0,1.1528195219403,2.69272933229316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36965233252463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,33.6737592727792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443511850813194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.37840181555137,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.437062287854782,0,0.509944148709909,1.3360870263278,0.459474497674225,2.75778293221613,0.909344378618873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p2@DPPA2 | |short_description=p2@DPPA2 | ||
}} | }} |
Latest revision as of 11:48, 19 September 2015
Short description: | p2@DPPA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_DPPA2_5end |
Coexpression cluster: | C112_gastric_pancreas_temporal_duodenum_small_extraskeletal_adrenal |
Association with transcript: | 86bp_to_ENST00000478945, NM_138815, uc003dxo.2_5end |
EntrezGene: | DPPA2 |
HGNC: | 19197 |
UniProt: | Q7Z7J5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 2.79e-41 | 7 |
germ cell | 2.79e-41 | 7 |
embryonic stem cell | 3.35e-15 | 5 |
Ontology term | p-value | n |
---|---|---|
testis | 5.06e-10 | 8 |
male reproductive organ | 1.56e-07 | 11 |
adrenal gland | 1.93e-07 | 3 |
adrenal cortex | 1.93e-07 | 3 |
adrenal/interrenal gland | 1.93e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.87e-13 | 22 |
germ cell cancer | 1.87e-13 | 22 |
pancreas adenocarcinoma | 2.49e-10 | 2 |
pancreatic carcinoma | 2.49e-10 | 2 |
pancreatic ductal adenocarcinoma | 2.49e-10 | 2 |
cell type cancer | 1.34e-07 | 143 |