FFCP PHASE1:Hg19::chrX:132092271..132092292,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=90161 | |EntrezGene=90161 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=19133 | |HGNC=19133 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-250bp_to_uc011mvc.1_5end | |association_with_transcript=-250bp_to_uc011mvc.1_5end | ||
|cluster_id=chrX:132092271..132092292,- | |||
|description=CAGE_peak_3_at_HS6ST2_5end | |description=CAGE_peak_3_at_HS6ST2_5end | ||
|id=chrX:132092271..132092292,- | |id=chrX:132092271..132092292,- | ||
|ontology_enrichment_celltype=CL:0000066!7.68e-16!254;CL:0002076!6.04e-10!43 | |ontology_enrichment_celltype=CL:0000066!7.68e-16!254;CL:0002076!6.04e-10!43 | ||
|ontology_enrichment_celltype_v019=CL:0002076;4.27e-13;42!CL:0002368;2.30e-10;13!CL:0002231;3.35e-08;3!CL:0000082;5.27e-08;19 | |ontology_enrichment_celltype_v019=CL:0002076;4.27e-13;42!CL:0002368;2.30e-10;13!CL:0002231;3.35e-08;3!CL:0000082;5.27e-08;19 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.92e-16,253;CL:0002076,2.37e-15,42;CL:0000223,4.58e-11,58;CL:0002368,3.02e-10,13;CL:0002231,4.71e-08,3;CL:0000082,6.44e-08,19 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:305!1.43e-12!106;DOID:0050687!5.05e-11!143;DOID:1749!5.41e-09!14 | |ontology_enrichment_disease=DOID:305!1.43e-12!106;DOID:0050687!5.05e-11!143;DOID:1749!5.41e-09!14 | ||
|ontology_enrichment_disease_v019=DOID:1749;1.23e-09;14!DOID:3905;7.64e-09;9!DOID:0050615;7.68e-08;16 | |ontology_enrichment_disease_v019=DOID:1749;1.23e-09;14!DOID:3905;7.64e-09;9!DOID:0050615;7.68e-08;16 | ||
|ontology_enrichment_disease_v019_2=DOID:305,1.30e-12,106;DOID:0050687,1.65e-10,143;DOID:1749,8.95e-10,14;DOID:162,1.36e-09,235;DOID:14566,3.68e-09,239;DOID:3905,1.19e-08,9;DOID:0050615,9.28e-08,16 | |||
|ontology_enrichment_uberon=UBERON:0001004!1.35e-08!72;UBERON:0000922!2.78e-08!612;UBERON:0004119!1.65e-07!169;UBERON:0000925!1.65e-07!169;UBERON:0006595!1.65e-07!169;UBERON:0000481!2.55e-07!347;UBERON:0000064!3.55e-07!219;UBERON:0000065!7.03e-07!53 | |ontology_enrichment_uberon=UBERON:0001004!1.35e-08!72;UBERON:0000922!2.78e-08!612;UBERON:0004119!1.65e-07!169;UBERON:0000925!1.65e-07!169;UBERON:0006595!1.65e-07!169;UBERON:0000481!2.55e-07!347;UBERON:0000064!3.55e-07!219;UBERON:0000065!7.03e-07!53 | ||
|ontology_enrichment_uberon_v019=UBERON:0000485;3.17e-08;7!UBERON:0004802;5.27e-08;19!UBERON:0000115;5.27e-08;19!UBERON:0005911;3.16e-07;36 | |ontology_enrichment_uberon_v019=UBERON:0000485;3.17e-08;7!UBERON:0004802;5.27e-08;19!UBERON:0000115;5.27e-08;19!UBERON:0005911;3.16e-07;36 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004802,6.44e-08,19;UBERON:0000115,6.44e-08,19;UBERON:0005153,1.83e-07,37;UBERON:0000065,9.83e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,1.39560233594486,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0.572471974262113,0.821246550437305,1.00434111675842,0,0,0,0,0,0,0,1.8072355126695,1.10926203050036,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.12786256184353,0,0,0,0,0,1.32348744029695,1.33037638477538,0.527008714158756,0.0654895377488563,0,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0.626984899610432,0,0.35576626268671,0.66944122552934,0,0,0,0,0.81014194788176,0.535798369704479,0.22452937262617,0.337834441449967,0,0.949265659568129,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0.454072282934794,0,0,0,0,0,0.23486899728753,0,0.140450806702248,0,0.122834317311768,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773043412653187,0.545492241181669,0.860413786167011,0.853815942907168,0.927708378250397,1.74290914304278,2.38420426535352,1.7662459561294,0.36497735907583,0,0,0,0,0,0.473227200159376,0.674338760312407,0.482022059766964,0.441175890929576,1.08939722046203,0.71181185733329,0.404493924480493,0.588664395376038,0.769494313892781,0,0,0,0,0,0,0,0,4.67356066463832,1.02940686179115,0,0,0,0.740707561268237,0,0,2.88662684050547,0.927443239800615,0.587043471179108,0,0,0,0,0,0,0,0,0,0.16798212819886,0.850650583454319,0,0,0,0,0,0.207328115540772,0,0.12624243342638,0.063497894292169,0,0,0,0.102827492703324,0,0,0.224262168690721,0.43596006883328,0.2933531432838,0,0,0,0,0,0.257207374262142,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0.508189248444927,0,0,0.167516265334349,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.23008073570678,2.00506470303285,2.3941057123333,0,0,0,0.902399225814824,1.30926073077505,0,1.46139224653261,2.00548094896464,0,0,0,0,0,0,0.764628819135115,1.66215201785745,0.447749509444357,0,0,0.256450125116389,0,0.650756789328606,0.309123034943167,1.92295876118521,1.15513299888823,0,0.650060246036521,0,0.580024309752732,0.462145851343933,0.614014698904518,0.137836572484531,0.107420244868274,0,0.170453254832202,0.712256285173899,2.64455864577565,2.30628080838127,3.1903178123646,2.12431339796655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0.235624804691373,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0.286822704408103,0,0,0,0,0,0,0,1.05844323998063,0,0,0.376575203107117,0.86101074534246,0,1.33029046061003,3.90529780351831,0,0,0,0,0,0,0,0,0.961416640147258,1.92495971052672,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,2.50634477090067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0.994147647766298,0.281338832821026,0,2.80166586185491,0.844501632511974,0,0.276283915531148,2.01546198283421,5.31797149011205,0,0,0,2.86433879480975,0,0.295930216910801,0,0,0,0.0927680981618513,0,0.520855522170466,2.0115799999125,0,4.43794448313449,5.59358030644086,0,0,0,0.173624994933292,0,0,0,0.110579259931225,0,0.219385397153973,1.30726156222788,0,0.230850775511391,0,0,0,7.27937391877454,0.31900115973192,0,0,0,4.39544717906069,0,0,0,0,0,0,2.10998064528027,0,2.82706142867882,2.380275037163,0,0,0,4.74433805888995,2.84197059576957,2.92381458615275,0.269604531922708,0,0.234264445725339,0,0,0,0.394584402849391,1.20990716048664,0.30607276163049,0.063186579628488,3.15679180770434,0.72581733978073,0.664653872707185,0.330991955875499,1.88359751044335,1.19472429772959,0.284609546029793,0,0.347119476670262,0.0979923974143777,0.174118413160805,0.17472666824203,0,3.19295893253981,1.97341156132701,2.29923279748986,0.290967049465258,0.706049013532002,1.35588444468319,0,2.78200456384186,0.126621591911757,0.977756913674015,0,0,0,1.00863292007874,0,0,0,0.372757606696298,0.942776138467182,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0.717873024576814,0.798716001995964,0,0,0.0671834724867263,0,3.49487848582361,0,0,0,0.590564889088493,0,0,0.408610218334727,0.321506296930038,0.962776056180637,0.83088067605837,0,0,0.364497339948148,0.335434687599266,0.788057072991982,0.891727998294968,2.74560874950457,3.04788476865836,0,0,0,0,0,0,0,0,3.77625595446959,0,1.81299346432201,0,0,0.258565912723101,0.52893040697076,0,0.704815022316672,0,0.471612915298998,0,0,0,0,1.91502377331055,0,0,0,0,1.41348686625211,0,0.488105059607853,0,0,0.110929051536852,0.434674820589684,0.830091809617385,3.99937305478741,3.1846314683746,0.856396000634902,1.6468607378872,0,0.579684114443301,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0.449803112163605,0.155262956876259,0,0,0,0,0,0.406870733204662,0,0.107410557042488,0,0,0,0,0,0,0,0,1.30497145982606,0,0,0,0,0,0,0,0,0,0.76872455576384,0,0.911579868532147,0,0,0,0,0.327609848846413,0,0,3.9997479170986,2.02714286418868,0,0,0,1.258915569475,0.622077260032973,0.383683113910955,0,0,1.85656384926424,0,0.425149840203366,0,0,0,0,0,0,0,0.385375350578757,0,0,0,0.252071696221718,0.414943514785307,0.161475645631851,0,5.10368136205333,0.707818340086442,1.28400018965175,1.61735932610474,0,0,3.97832444232549,0.752103283492572,0,0.781514011233092,0,0.163771917510097,0,0.135075169236789,0,0,0.253663240775627,0,0,0.496211178389294,0,4.98273467794422,0,0,0,0,0.887023701626388,0,0,0.203909198930495,0.460409414939944,0,0,0.313972371402056,1.09980912941201,0,0,0,0,0,0,0,0.521574816907738,0,0,0.3414369541879,0,0.860454717640555,0,0,0.423387050190929,0.9164274741762,0,0,0,0,0,0,0.102662806856247,0,0,0,0,1.07028081699812,1.01651473835064,0,1.35866559210006,0,0.218559560503957,0,0,0.235676547101626,0.196308467114945,0,0,0,0.187967835959707,0.0644578879735772,0,3.21397089490184,4.94052820401969,1.60482733378337,2.19100916473955,0.458729283404541,0,0.157771562193185,0.135982980381829,0,0.5290268405154,0,0,0,2.27099564703142,0.874124575709564,1.52038201213724,0.713921808193872,0.534434810531121,1.01084389488329,2.75778293221613,0.454672189309436,0,0.829169439458779,0.103432995861895,0.213233981900981,0,0,0.186224142887574,0,0,0,0.217716747896961,0.684466602170562,0.202056159043763,0.215166616178029,0,0.732629417498771,0,0,0,0,0.488965776731466,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,1.39560233594486,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0.572471974262113,0.821246550437305,1.00434111675842,0,0,0,0,0,0,0,1.8072355126695,1.10926203050036,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.12786256184353,0,0,0,0,0,1.32348744029695,1.33037638477538,0.527008714158756,0.0654895377488563,0,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0.626984899610432,0,0.35576626268671,0.66944122552934,0,0,0,0,0.81014194788176,0.535798369704479,0.22452937262617,0.337834441449967,0,0.949265659568129,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0.454072282934794,0,0,0,0,0,0.23486899728753,0,0.140450806702248,0,0.122834317311768,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773043412653187,0.545492241181669,0.860413786167011,0.853815942907168,0.927708378250397,1.74290914304278,2.38420426535352,1.7662459561294,0.36497735907583,0,0,0,0,0,0.473227200159376,0.674338760312407,0.482022059766964,0.441175890929576,1.08939722046203,0.71181185733329,0.404493924480493,0.588664395376038,0.769494313892781,0,0,0,0,0,0,0,0,4.67356066463832,1.02940686179115,0,0,0,0.740707561268237,0,0,2.88662684050547,0.927443239800615,0.587043471179108,0,0,0,0,0,0,0,0,0,0.16798212819886,0.850650583454319,0,0,0,0,0,0.207328115540772,0,0.12624243342638,0.063497894292169,0,0,0,0.102827492703324,0,0,0.224262168690721,0.43596006883328,0.2933531432838,0,0,0,0,0,0.257207374262142,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0.508189248444927,0,0,0.167516265334349,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.23008073570678,2.00506470303285,2.3941057123333,0,0,0,0.902399225814824,1.30926073077505,0,1.46139224653261,2.00548094896464,0,0,0,0,0,0,0.764628819135115,1.66215201785745,0.447749509444357,0,0,0.256450125116389,0,0.650756789328606,0.309123034943167,1.92295876118521,1.15513299888823,0,0.650060246036521,0,0.580024309752732,0.462145851343933,0.614014698904518,0.137836572484531,0.107420244868274,0,0.170453254832202,0.712256285173899,2.64455864577565,2.30628080838127,3.1903178123646,2.12431339796655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0.235624804691373,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0.286822704408103,0,0,0,0,0,0,0,1.05844323998063,0,0,0.376575203107117,0.86101074534246,0,1.33029046061003,3.90529780351831,0,0,0,0,0,0,0,0,0.961416640147258,1.92495971052672,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,2.50634477090067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0.994147647766298,0.281338832821026,0,2.80166586185491,0.844501632511974,0,0.276283915531148,2.01546198283421,5.31797149011205,0,0,0,2.86433879480975,0,0.295930216910801,0,0,0,0.0927680981618513,0,0.520855522170466,2.0115799999125,0,4.43794448313449,5.59358030644086,0,0,0,0.173624994933292,0,0,0,0.110579259931225,0,0.219385397153973,1.30726156222788,0,0.230850775511391,0,0,0,7.27937391877454,0.31900115973192,0,0,0,4.39544717906069,0,0,0,0,0,0,2.10998064528027,0,2.82706142867882,2.380275037163,0,0,0,4.74433805888995,2.84197059576957,2.92381458615275,0.269604531922708,0,0.234264445725339,0,0,0,0.394584402849391,1.20990716048664,0.30607276163049,0.063186579628488,3.15679180770434,0.72581733978073,0.664653872707185,0.330991955875499,1.88359751044335,1.19472429772959,0.284609546029793,0,0.347119476670262,0.0979923974143777,0.174118413160805,0.17472666824203,0,3.19295893253981,1.97341156132701,2.29923279748986,0.290967049465258,0.706049013532002,1.35588444468319,0,2.78200456384186,0.126621591911757,0.977756913674015,0,0,0,1.00863292007874,0,0,0,0.372757606696298,0.942776138467182,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0.717873024576814,0.798716001995964,0,0,0.0671834724867263,0,3.49487848582361,0,0,0,0.590564889088493,0,0,0.408610218334727,0.321506296930038,0.962776056180637,0.83088067605837,0,0,0.364497339948148,0.335434687599266,0.788057072991982,0.891727998294968,2.74560874950457,3.04788476865836,0,0,0,0,0,0,0,0,3.77625595446959,0,1.81299346432201,0,0,0.258565912723101,0.52893040697076,0,0.704815022316672,0,0.471612915298998,0,0,0,0,1.91502377331055,0,0,0,0,1.41348686625211,0,0.488105059607853,0,0,0.110929051536852,0.434674820589684,0.830091809617385,3.99937305478741,3.1846314683746,0.856396000634902,1.6468607378872,0,0.579684114443301,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0.449803112163605,0.155262956876259,0,0,0,0,0,0.406870733204662,0,0.107410557042488,0,0,0,0,0,0,0,0,1.30497145982606,0,0,0,0,0,0,0,0,0,0.76872455576384,0,0.911579868532147,0,0,0,0,0.327609848846413,0,0,3.9997479170986,2.02714286418868,0,0,0,1.258915569475,0.622077260032973,0.383683113910955,0,0,1.85656384926424,0,0.425149840203366,0,0,0,0,0,0,0,0.385375350578757,0,0,0,0.252071696221718,0.414943514785307,0.161475645631851,0,5.10368136205333,0.707818340086442,1.28400018965175,1.61735932610474,0,0,3.97832444232549,0.752103283492572,0,0.781514011233092,0,0.163771917510097,0,0.135075169236789,0,0,0.253663240775627,0,0,0.496211178389294,0,4.98273467794422,0,0,0,0,0.887023701626388,0,0,0.203909198930495,0.460409414939944,0,0,0.313972371402056,1.09980912941201,0,0,0,0,0,0,0,0.521574816907738,0,0,0.3414369541879,0,0.860454717640555,0,0,0.423387050190929,0.9164274741762,0,0,0,0,0,0,0.102662806856247,0,0,0,0,1.07028081699812,1.01651473835064,0,1.35866559210006,0,0.218559560503957,0,0,0.235676547101626,0.196308467114945,0,0,0,0.187967835959707,0.0644578879735772,0,3.21397089490184,4.94052820401969,1.60482733378337,2.19100916473955,0.458729283404541,0,0.157771562193185,0.135982980381829,0,0.5290268405154,0,0,0,2.27099564703142,0.874124575709564,1.52038201213724,0.713921808193872,0.534434810531121,1.01084389488329,2.75778293221613,0.454672189309436,0,0.829169439458779,0.103432995861895,0.213233981900981,0,0,0.186224142887574,0,0,0,0.217716747896961,0.684466602170562,0.202056159043763,0.215166616178029,0,0.732629417498771,0,0,0,0,0.488965776731466,0,0,0,0 | ||
|short_description=p3@HS6ST2 | |short_description=p3@HS6ST2 | ||
}} | }} |
Latest revision as of 11:51, 19 September 2015
Short description: | p3@HS6ST2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HS6ST2_5end |
Coexpression cluster: | NA |
Association with transcript: | -250bp_to_uc011mvc.1_5end |
EntrezGene: | HS6ST2 |
HGNC: | 19133 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.92e-16 | 253 |
endo-epithelial cell | 2.37e-15 | 42 |
endodermal cell | 4.58e-11 | 58 |
respiratory epithelial cell | 3.02e-10 | 13 |
epithelial cell of prostate | 4.71e-08 | 3 |
epithelial cell of lung | 6.44e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
respiratory tract epithelium | 6.44e-08 | 19 |
lung epithelium | 6.44e-08 | 19 |
epithelial bud | 1.83e-07 | 37 |
respiratory tract | 9.83e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.30e-12 | 106 |
cell type cancer | 1.65e-10 | 143 |
squamous cell carcinoma | 8.95e-10 | 14 |
cancer | 1.36e-09 | 235 |
disease of cellular proliferation | 3.68e-09 | 239 |
lung carcinoma | 1.19e-08 | 9 |
respiratory system cancer | 9.28e-08 | 16 |