FFCP PHASE1:Hg19::chr1:84874012..84874020,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:84874012..84874020,+
|short_description=p5@DNASE2B
|description=CAGE_peak_5_at_DNASE2B_5end
|association_with_transcript=-13bp_to_NM_058248,uc001dju.1_5end...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=58511 | |EntrezGene=58511 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28875 | |HGNC=28875 | ||
|TSSclassifier=strong | |||
|UniProt=Q8WZ79 | |UniProt=Q8WZ79 | ||
|association_with_transcript=-13bp_to_NM_058248,uc001dju.1_5end | |||
|cluster_id=chr1:84874012..84874020,+ | |||
|coexpression_cluster_id=C37 | |||
|description=CAGE_peak_5_at_DNASE2B_5end | |||
|id=chr1:84874012..84874020,+ | |||
|ontology_enrichment_celltype=CL:0002619!6.14e-18!3;CL:0002194!1.65e-14!63;CL:0000576!1.65e-14!63;CL:0000040!1.65e-14!63;CL:0000559!1.65e-14!63;CL:0002009!5.58e-14!65;CL:0000839!8.63e-13!70;CL:0000557!1.43e-12!71;CL:0000766!1.44e-11!76;CL:0000235!1.54e-09!10;CL:0002566!5.37e-07!1;CL:0000763!5.48e-07!112;CL:0000049!5.48e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000235;1.13e-15;6!CL:0002619;1.40e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,1.13e-15,6;CL:0002619,1.40e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0006298;1.07e-23;1!UBERON:0008801;1.67e-23;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;3.24e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,2.90e-12,2 | |||
|ontology_enrichment_uberon=UBERON:0001829!4.39e-13!2;UBERON:0002390!4.32e-12!102;UBERON:0003061!4.32e-12!102;UBERON:0002371!7.44e-11!80;UBERON:0002193!1.05e-10!112;UBERON:0002405!2.46e-10!115;UBERON:0001474!6.56e-10!86;UBERON:0001044!1.31e-09!6;UBERON:0003293!1.31e-09!6;UBERON:0003294!1.31e-09!6;UBERON:0010047!1.31e-09!6;UBERON:0000167!1.31e-09!6;UBERON:0003408!1.64e-09!10;UBERON:0004765!4.88e-08!101;UBERON:0001434!4.88e-08!101;UBERON:0002106!5.42e-08!3;UBERON:0004854!5.42e-08!3;UBERON:0009034!5.42e-08!3;UBERON:0002095!5.42e-08!3;UBERON:0004782!5.42e-08!3;UBERON:0003281!5.42e-08!3;UBERON:0009664!5.42e-08!3;UBERON:0002296!5.42e-08!3;UBERON:0005602!5.42e-08!3;UBERON:0001179!5.42e-08!3;UBERON:0006293!5.42e-08!3;UBERON:0001736!2.09e-07!1;UBERON:0006298!2.09e-07!1;UBERON:0001831!2.36e-07!1;UBERON:0001567!2.36e-07!1;UBERON:0008801!2.36e-07!1;UBERON:0004177!2.45e-07!7;UBERON:0002171!3.36e-07!1;UBERON:0006518!3.36e-07!1;UBERON:0008949!3.36e-07!1;UBERON:0000101!3.36e-07!1;UBERON:0002167!3.36e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;2.55e-45;2!UBERON:0001044;5.37e-34;6!UBERON:0003293;5.37e-34;6!UBERON:0003294;5.37e-34;6!UBERON:0010047;5.37e-34;6!UBERON:0003408;5.37e-34;6!UBERON:0000167;5.37e-34;6!UBERON:0001736;1.07e-23;1!UBERON:0001831;1.67e-23;1!UBERON:0001567;1.67e-23;1!UBERON:0002171;5.13e-23;1!UBERON:0006518;5.13e-23;1!UBERON:0008949;5.13e-23;1!UBERON:0000101;5.13e-23;1!UBERON:0002167;5.13e-23;1!UBERON:0001041;5.02e-15;14!UBERON:0004089;1.85e-12;2!UBERON:0000161;2.98e-11;19!UBERON:0000166;2.98e-11;19!UBERON:0000165;7.83e-08;28!UBERON:0002365;5.35e-07;31!UBERON:0002330;5.35e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,2.55e-45,2;UBERON:0001044,5.37e-34,6;UBERON:0003293,5.37e-34,6;UBERON:0003294,5.37e-34,6;UBERON:0010047,5.37e-34,6;UBERON:0000167,5.37e-34,6;UBERON:0001736,1.07e-23,1;UBERON:0006298,1.07e-23,1;UBERON:0001831,1.67e-23,1;UBERON:0001567,1.67e-23,1;UBERON:0008801,1.67e-23,1;UBERON:0002171,6.40e-23,1;UBERON:0006518,6.40e-23,1;UBERON:0008949,6.40e-23,1;UBERON:0000101,6.40e-23,1;UBERON:0002167,6.40e-23,1;UBERON:0003408,9.82e-21,10;UBERON:0004089,1.85e-12,2;UBERON:0000166,8.34e-10,22;UBERON:0000165,1.39e-07,29;UBERON:0000930,1.39e-07,29;UBERON:0002365,3.95e-07,31;UBERON:0002330,3.95e-07,31 | |||
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|short_description=p5@DNASE2B | |||
}} | }} |
Latest revision as of 12:02, 19 September 2015
Short description: | p5@DNASE2B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_DNASE2B_5end |
Coexpression cluster: | C37_salivary_submaxillary_parotid_seminal_tongue_ductus_trachea |
Association with transcript: | -13bp_to_NM_058248, uc001dju.1_5end |
EntrezGene: | DNASE2B |
HGNC: | 28875 |
UniProt: | Q8WZ79 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 1.13e-15 | 6 |
adult endothelial progenitor cell | 1.40e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
major salivary gland | 2.55e-45 | 2 |
saliva-secreting gland | 5.37e-34 | 6 |
gland of oral region | 5.37e-34 | 6 |
gland of foregut | 5.37e-34 | 6 |
oral gland | 5.37e-34 | 6 |
oral cavity | 5.37e-34 | 6 |
submandibular gland | 1.07e-23 | 1 |
submandibular gland primordium | 1.07e-23 | 1 |
parotid gland | 1.67e-23 | 1 |
cheek | 1.67e-23 | 1 |
parotid gland primordium | 1.67e-23 | 1 |
lower lobe of right lung | 6.40e-23 | 1 |
right lung lobe | 6.40e-23 | 1 |
lower lobe of lung | 6.40e-23 | 1 |
lobe of lung | 6.40e-23 | 1 |
right lung | 6.40e-23 | 1 |
gland of gut | 9.82e-21 | 10 |
midface | 1.85e-12 | 2 |
oral opening | 8.34e-10 | 22 |
mouth | 1.39e-07 | 29 |
stomodeum | 1.39e-07 | 29 |
exocrine gland | 3.95e-07 | 31 |
exocrine system | 3.95e-07 | 31 |
Ontology term | p-value | n |
---|---|---|
melanoma | 2.90e-12 | 2 |