FFCP PHASE1:Hg19::chr6:10412338..10412345,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:10412338..10412345,- to FFCP PHASE1:Hg19::chr6:10412338..10412345,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7020 | |EntrezGene=7020 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11742 | |HGNC=11742 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-59bp_to_ENST00000474952_5end | |||
|cluster_id=chr6:10412338..10412345,- | |||
|description=CAGE_peak_17_at_TFAP2A_5end | |||
|id=chr6:10412338..10412345,- | |||
|ontology_enrichment_celltype=CL:0000066!1.56e-32!254;CL:0002077!5.81e-11!33;CL:0002076!7.15e-11!43;CL:0000075!5.52e-10!27;CL:0000710!6.81e-09!20;CL:0000077!1.44e-07!19;CL:0000221!1.55e-07!71;CL:0000076!2.57e-07!62;CL:0000223!2.87e-07!59;CL:0000148!3.90e-07!10;CL:0000541!3.90e-07!10;CL:0002149!9.39e-07!6;CL:0002255!9.39e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000148;1.86e-18;10!CL:0000147;3.80e-13;14!CL:0002567;8.87e-11;3!CL:0000075;2.03e-09;27!CL:0000710;3.78e-09;20!CL:0002252;3.86e-09;1!CL:0002566;1.05e-08;1!CL:0000313;1.05e-08;1!CL:0002077;2.81e-08;34!CL:0000150;4.77e-08;9!CL:0000622;8.40e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,9.64e-19,10;CL:0000541,9.64e-19,10;CL:0000147,2.39e-13,14;CL:0002567,5.41e-11,3;CL:0002077,5.59e-10,34;CL:0000075,1.54e-09,27;CL:0000710,2.76e-09,20;CL:0002252,3.87e-09,1;CL:0000066,4.25e-09,253;CL:0002566,7.75e-09,1;CL:0000313,1.53e-08,1;CL:0000150,6.69e-08,9;CL:0002076,7.70e-08,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!1.48e-26!143;DOID:305!2.51e-24!106;DOID:14566!2.16e-21!239;DOID:162!2.00e-20!235;DOID:3001!9.39e-07!6 | |||
|ontology_enrichment_disease_v019=DOID:3112;3.06e-09;1!DOID:2152;1.05e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,3.06e-09,1;DOID:2152,1.53e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.40e-08!9;UBERON:0001004!5.22e-08!72;UBERON:0000995!1.34e-07!21;UBERON:0001557!2.40e-07!19;UBERON:0005795!4.48e-07!22;UBERON:0003975!4.48e-07!22;UBERON:0004175!9.17e-07!25;UBERON:0004119!9.25e-07!169;UBERON:0000925!9.25e-07!169;UBERON:0006595!9.25e-07!169;UBERON:0000065!9.99e-07!53 | |||
|ontology_enrichment_uberon_v019=UBERON:0004911;1.05e-08;1!UBERON:0003343;1.65e-08;4!UBERON:0004785;1.65e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,1.53e-08,1;UBERON:0003343,2.15e-08,4;UBERON:0004785,2.15e-08,4 | |||
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 | ||
|short_description=p17@TFAP2A | |||
}} | }} |
Latest revision as of 12:47, 19 September 2015
Short description: | p17@TFAP2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_TFAP2A_5end |
Coexpression cluster: | NA |
Association with transcript: | -59bp_to_ENST00000474952_5end |
EntrezGene: | TFAP2A |
HGNC: | 11742 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 9.64e-19 | 10 |
melanoblast | 9.64e-19 | 10 |
pigment cell | 2.39e-13 | 14 |
light melanocyte | 5.41e-11 | 3 |
ecto-epithelial cell | 5.59e-10 | 34 |
columnar/cuboidal epithelial cell | 1.54e-09 | 27 |
neurecto-epithelial cell | 2.76e-09 | 20 |
epithelial cell of esophagus | 3.87e-09 | 1 |
epithelial cell | 4.25e-09 | 253 |
dark melanocyte | 7.75e-09 | 1 |
serous secreting cell | 1.53e-08 | 1 |
glandular epithelial cell | 6.69e-08 | 9 |
endo-epithelial cell | 7.70e-08 | 42 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 1.53e-08 | 1 |
mucosa of oral region | 2.15e-08 | 4 |
respiratory system mucosa | 2.15e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 3.06e-09 | 1 |
ovary epithelial cancer | 1.53e-08 | 1 |