FFCP PHASE1:Hg19::chr3:111578105..111578122,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=90102 | |EntrezGene=90102 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29573 | |HGNC=29573 | ||
|TSSclassifier=strong | |||
|UniProt=E9PFQ4 | |UniProt=E9PFQ4 | ||
|association_with_transcript=-15bp_to_ENST00000498699_5end | |association_with_transcript=-15bp_to_ENST00000498699_5end | ||
|cluster_id=chr3:111578105..111578122,+ | |||
|description=CAGE_peak_1_at_PHLDB2_5end | |description=CAGE_peak_1_at_PHLDB2_5end | ||
|id=chr3:111578105..111578122,+ | |id=chr3:111578105..111578122,+ | ||
|ontology_enrichment_celltype=CL:0000066!9.59e-14!254;CL:0000076!5.53e-07!62;CL:0000220!7.05e-07!246;CL:0000359!9.30e-07!32 | |ontology_enrichment_celltype=CL:0000066!9.59e-14!254;CL:0000076!5.53e-07!62;CL:0000220!7.05e-07!246;CL:0000359!9.30e-07!32 | ||
|ontology_enrichment_celltype_v019=CL:0000359;9.25e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.78e-13,253;CL:0000359,3.70e-07,32 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003104!6.26e-12!238;UBERON:0009142!6.26e-12!238;UBERON:0004119!8.85e-11!169;UBERON:0000925!8.85e-11!169;UBERON:0006595!8.85e-11!169;UBERON:0002100!9.01e-10!216;UBERON:0000481!2.49e-09!347;UBERON:0000468!3.53e-09!659;UBERON:0001007!1.04e-08!155;UBERON:0001555!1.04e-08!155;UBERON:0007026!1.04e-08!155;UBERON:0000467!2.18e-08!625;UBERON:0000480!3.67e-08!626;UBERON:0000475!1.25e-07!365;UBERON:0000477!1.61e-07!286;UBERON:0000077!2.46e-07!130;UBERON:0004921!4.45e-07!129;UBERON:0004185!4.45e-07!129;UBERON:0000478!8.15e-07!24;UBERON:0005631!8.53e-07!14;UBERON:0000158!8.53e-07!14 | |ontology_enrichment_uberon=UBERON:0003104!6.26e-12!238;UBERON:0009142!6.26e-12!238;UBERON:0004119!8.85e-11!169;UBERON:0000925!8.85e-11!169;UBERON:0006595!8.85e-11!169;UBERON:0002100!9.01e-10!216;UBERON:0000481!2.49e-09!347;UBERON:0000468!3.53e-09!659;UBERON:0001007!1.04e-08!155;UBERON:0001555!1.04e-08!155;UBERON:0007026!1.04e-08!155;UBERON:0000467!2.18e-08!625;UBERON:0000480!3.67e-08!626;UBERON:0000475!1.25e-07!365;UBERON:0000477!1.61e-07!286;UBERON:0000077!2.46e-07!130;UBERON:0004921!4.45e-07!129;UBERON:0004185!4.45e-07!129;UBERON:0000478!8.15e-07!24;UBERON:0005631!8.53e-07!14;UBERON:0000158!8.53e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0000478;5.37e-07;24!UBERON:0001737;5.61e-07;9!UBERON:0001557;5.61e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,4.50e-09,199;UBERON:0004119,2.18e-08,160;UBERON:0000925,2.18e-08,160;UBERON:0006595,2.18e-08,160;UBERON:0000478,4.26e-07,24;UBERON:0005631,4.47e-07,14;UBERON:0000158,4.47e-07,14;UBERON:0001737,5.67e-07,9 | |||
|phase1_expression=4.90531624030503,9.42042305120326,7.89344662937438,5.00366491765652,14.7497161161005,4.36169262050184,2.53299878168311,3.15859936713415,0.522371256399677,2.94880723801811,1.39560233594486,34.9506195408276,43.2577844294664,1.60896258848061,2.98257638155124,12.101852636132,12.0538905604795,11.684961446198,17.0776479576677,0.738726348460727,0.204000691244253,0,0.286235987131057,0.547497700291537,0.376627918784408,1.29902789771517,1.88831355734875,1.10195093839151,0.393364276848904,2.30297638858328,4.64448369948228,2.75826367343678,1.8072355126695,5.17655614233503,0,0,0.293600439334847,4.43196326825502,2.60707781711184,3.90619567288533,0,0,0,0,0,0,1.16214518452842,0.411167888021826,0,0.28769239232215,0,0.236482229888585,1.37898272294647,2.5819387343353,1.35426486594342,0.564727018627814,0.545812300115692,0,2.75475503133812,1.92557416245656,1.27867425159808,0,0,0,2.32167390902867,1.13477044938228,0.622822248995575,0.251248665256743,0,0,3.63239701580021,3.68277635987565,2.53169909952708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661044872784862,0,2.84606484554724,7.04684627245127,2.6759125968766,2.64342657158052,11.2101712596307,0,4.72103448273199,4.32311839024081,4.93443597598822,0,0,0,0,0,0,0,0,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0,0.383220493601921,0.34362744548263,0,0.318565414324097,1.30216690771284,0,0,0.639933055772092,1.24930726552346,0.473554504088034,0,6.8546292696409,8.29064606928873,5.06885413589796,0,3.35350429851818,6.90457833955064,0.361439152384566,0.50133791063589,1.30361867064741,0,0.486634870302636,0.850813354476611,2.66075276955077,4.47957407034943,2.88153966094968,22.5863078741376,12.2358866118862,0,0,0,1.43094374583205,0,0.371457501329565,1.39133685156694,0.860234595106124,1.38856200643038,2.26123176769604,0,1.37559020970034,0.835979866147242,1.8089173141853,4.62496141492723,7.02913286805807,14.5018554159293,2.28081631715554,8.54217201418593,0.735326160691737,4.86085168729056,1.16089646769304,0.44905874525234,0.450445921933289,1.53316637465883,0,0.732806975721629,2.63560834872127,7.75560528296651,5.66922267785295,4.47274756525787,6.20489507156441,106.854208916268,15.4891775204359,7.09336764396714,4.48542080113846,9.60740961567345,5.67335361359468,2.48968828319813,2.55950276932407,1.47115712802113,0.454072282934794,1.72852777344,0.468642863667593,0.312160076830321,0,0.149448680551801,0.23486899728753,0.485618833104395,0,0.816616685019573,0.245668634623536,1.03325781175765,3.56400857184616,2.22540236350701,0,1.43723628363248,0.168336113954066,0.375355559615893,0.277064115484183,2.63386572528503,0.30648779579902,4.8076178850111,2.60894021268048,3.7671823494661,3.84403299873421,4.23863802319124,0.600182192168805,1.03052529238439,17.0042756430115,3.53622027030021,3.03797398034279,2.92311015483596,12.1168211637175,7.45604179002625,0.80823028409406,3.90510551768276,1.0075209822764,4.40857540007268,44.256735374395,31.6385499885368,112.42740139249,0,0.132529768321485,0.232387885739037,0.10366105501537,0.504641701751257,0,3.12899064659632,7.07565032012174,2.76269842704961,1.85747171212792,9.38443326170461,35.9652672121125,47.2037132218685,52.2993934847156,46.5440564930702,51.6374282499003,55.2840542528855,43.2808499194128,50.6251380023393,71.1782240350822,0,0,3.7041661019826,0,1.26755034821831,0,13.5881678536723,0,2.95172252503473,3.08822058537346,53.6678895648179,24.7283857166763,52.275065654048,58.3307204498736,0.325808305310325,0,7.21656710126366,0.115930404975077,7.27933904262094,10.5387506865584,12.5006088395685,7.80042024161853,3.95102198979638,5.15091697256924,0,0,0,38.4308719345786,59.4656733823963,39.8388023251106,39.0475158984419,25.2851526507147,34.1210584457038,0,0,0.621984346622316,0.576479813667846,2.27236380167484,1.07946420296687,0,0,5.13217338068116,0,0.300343057843917,0.571652865261156,1.45770409648969,9.15516144549888,1.68678057388185,10.7295524078956,0,0,2.6593811658487,2.08014873822732,0.257207374262142,0,0,17.0143812453196,3.7983512377401,2.46972101034231,0.65147236858747,12.7941101547316,4.75171123760058,73.8526473795986,30.5036710510103,58.4841998415034,0,0,0,1.91699884393266,2.29723871668228,0,3.18518874668674,3.08214483825575,1.79060963239896,0,4.72873824484625,11.8595166172735,12.7059605916951,0,0,0,0,0,0.749007023947182,0,1.65766205374414,1.96306386750624,2.00068208423871,0.271265023699736,9.35868876888632,5.35286966391485,8.67363282686641,7.1456263145555,3.00946099727719,2.27407504055985,0,0.664225598535437,2.94990669666725,2.17209036170207,0.391602314925481,0,0.413536052245775,1.94142780736755,1.28073069364133,6.97193414326397,19.9722527412596,25.0983943463635,4.71404834855676,7.82656063769118,6.73584226639377,8.07276640310916,13.3043884757343,4.50390979202101,1.48418066444991,1.23367755042124,2.84098760501003,3.20295908453856,0.519254429183621,1.62694529843943,3.02148623979056,2.20557117333613,10.1289087829486,4.47776347841966,1.45672934405374,1.83574180943194,2.25599806453706,9.31885578963419,2.35304930753057,4.38417673959782,6.64975262025117,1.13733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| ||
|short_description=p1@PHLDB2 | |short_description=p1@PHLDB2 | ||
}} | }} |
Latest revision as of 12:52, 19 September 2015
Short description: | p1@PHLDB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PHLDB2_5end |
Coexpression cluster: | NA |
Association with transcript: | -15bp_to_ENST00000498699_5end |
EntrezGene: | PHLDB2 |
HGNC: | 29573 |
UniProt: | E9PFQ4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.78e-13 | 253 |
vascular associated smooth muscle cell | 3.70e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
trunk | 4.50e-09 | 199 |
endoderm-derived structure | 2.18e-08 | 160 |
endoderm | 2.18e-08 | 160 |
presumptive endoderm | 2.18e-08 | 160 |
extraembryonic structure | 4.26e-07 | 24 |
extraembryonic membrane | 4.47e-07 | 14 |
membranous layer | 4.47e-07 | 14 |
larynx | 5.67e-07 | 9 |