FFCP PHASE1:Hg19::chr6:10417399..10417415,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7020 | |EntrezGene=7020 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11742 | |HGNC=11742 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=24bp_to_ENST00000490875_5end | |association_with_transcript=24bp_to_ENST00000490875_5end | ||
|cluster_id=chr6:10417399..10417415,- | |||
|coexpression_cluster_id=C595 | |coexpression_cluster_id=C595 | ||
|description=CAGE_peak_32_at_TFAP2A_5end | |description=CAGE_peak_32_at_TFAP2A_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000066!1.94e-17!254;CL:0000622!1.42e-12!5;CL:0002150!1.24e-11!3;CL:0000861!1.24e-11!3;CL:0000150!1.16e-10!9;CL:0000154!1.75e-10!6;CL:0000148!5.77e-10!10;CL:0000541!5.77e-10!10;CL:0002077!1.08e-09!33;CL:0000317!5.09e-09!2;CL:1000448!5.09e-09!2;CL:0002308!5.09e-09!2;CL:0002140!5.09e-09!2;CL:0002322!1.89e-07!5;CL:0000147!5.32e-07!14;CL:0002159!8.19e-07!13 | |ontology_enrichment_celltype=CL:0000066!1.94e-17!254;CL:0000622!1.42e-12!5;CL:0002150!1.24e-11!3;CL:0000861!1.24e-11!3;CL:0000150!1.16e-10!9;CL:0000154!1.75e-10!6;CL:0000148!5.77e-10!10;CL:0000541!5.77e-10!10;CL:0002077!1.08e-09!33;CL:0000317!5.09e-09!2;CL:1000448!5.09e-09!2;CL:0002308!5.09e-09!2;CL:0002140!5.09e-09!2;CL:0002322!1.89e-07!5;CL:0000147!5.32e-07!14;CL:0002159!8.19e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0002567;9.10e-34;3!CL:0000148;6.19e-23;10!CL:0000147;1.30e-16;14!CL:0000317;1.29e-13;2!CL:1000448;1.29e-13;2!CL:0002308;1.29e-13;2!CL:0002140;1.29e-13;2!CL:0000150;5.52e-12;9!CL:0000710;7.54e-12;20!CL:0002077;4.90e-11;34!CL:0000075;5.98e-09;27 | |ontology_enrichment_celltype_v019=CL:0002567;9.10e-34;3!CL:0000148;6.19e-23;10!CL:0000147;1.30e-16;14!CL:0000317;1.29e-13;2!CL:1000448;1.29e-13;2!CL:0002308;1.29e-13;2!CL:0002140;1.29e-13;2!CL:0000150;5.52e-12;9!CL:0000710;7.54e-12;20!CL:0002077;4.90e-11;34!CL:0000075;5.98e-09;27 | ||
|ontology_enrichment_celltype_v019_2=CL:0002567,7.70e-34,3;CL:0000148,5.96e-23,10;CL:0000541,5.96e-23,10;CL:0000147,1.26e-16,14;CL:0000317,1.55e-13,2;CL:1000448,1.55e-13,2;CL:0002308,1.55e-13,2;CL:0002140,1.55e-13,2;CL:0002077,4.48e-12,34;CL:0000150,6.16e-12,9;CL:0000710,7.40e-12,20;CL:0000075,5.90e-09,27 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:305!2.78e-14!106;DOID:1749!2.57e-09!14;DOID:0050687!4.09e-09!143 | |ontology_enrichment_disease=DOID:305!2.78e-14!106;DOID:1749!2.57e-09!14;DOID:0050687!4.09e-09!143 | ||
|ontology_enrichment_disease_v019=DOID:1749;5.36e-08;14 | |ontology_enrichment_disease_v019=DOID:1749;5.36e-08;14 | ||
|ontology_enrichment_disease_v019_2=DOID:1749,5.18e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.85e-25!9;UBERON:0001557!2.80e-14!19;UBERON:0008947!1.91e-09!38;UBERON:0003258!1.91e-09!38;UBERON:0001004!2.65e-09!72;UBERON:0002419!5.09e-09!2;UBERON:0007771!5.09e-09!2;UBERON:0003297!5.09e-09!2;UBERON:0001821!5.09e-09!2;UBERON:0003487!5.09e-09!2;UBERON:0001820!5.09e-09!2;UBERON:0005089!5.09e-09!2;UBERON:0005088!5.09e-09!2;UBERON:0000072!6.61e-09!46;UBERON:0000065!2.07e-07!53 | |ontology_enrichment_uberon=UBERON:0001737!1.85e-25!9;UBERON:0001557!2.80e-14!19;UBERON:0008947!1.91e-09!38;UBERON:0003258!1.91e-09!38;UBERON:0001004!2.65e-09!72;UBERON:0002419!5.09e-09!2;UBERON:0007771!5.09e-09!2;UBERON:0003297!5.09e-09!2;UBERON:0001821!5.09e-09!2;UBERON:0003487!5.09e-09!2;UBERON:0001820!5.09e-09!2;UBERON:0005089!5.09e-09!2;UBERON:0005088!5.09e-09!2;UBERON:0000072!6.61e-09!46;UBERON:0000065!2.07e-07!53 | ||
|ontology_enrichment_uberon_v019=UBERON:0002419;1.29e-13;2!UBERON:0007771;1.29e-13;2!UBERON:0003297;1.29e-13;2!UBERON:0001821;1.29e-13;2!UBERON:0003487;1.29e-13;2!UBERON:0001820;1.29e-13;2!UBERON:0003343;1.86e-07;4!UBERON:0004785;1.86e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0002419;1.29e-13;2!UBERON:0007771;1.29e-13;2!UBERON:0003297;1.29e-13;2!UBERON:0001821;1.29e-13;2!UBERON:0003487;1.29e-13;2!UBERON:0001820;1.29e-13;2!UBERON:0003343;1.86e-07;4!UBERON:0004785;1.86e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002419,1.55e-13,2;UBERON:0007771,1.55e-13,2;UBERON:0003297,1.55e-13,2;UBERON:0001821,1.55e-13,2;UBERON:0003487,1.55e-13,2;UBERON:0001820,1.55e-13,2;UBERON:0005089,1.55e-13,2;UBERON:0005088,1.55e-13,2;UBERON:0003343,1.92e-07,4;UBERON:0004785,1.92e-07,4 | |||
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| ||
|short_description=p32@TFAP2A | |short_description=p32@TFAP2A | ||
}} | }} |
Latest revision as of 13:05, 19 September 2015
Short description: | p32@TFAP2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_32_at_TFAP2A_5end |
Coexpression cluster: | C595_teratocarcinoma_HES3GFP_H9_testicular_Wilms_hepatoblastoma_neuroblastoma |
Association with transcript: | 24bp_to_ENST00000490875_5end |
EntrezGene: | TFAP2A |
HGNC: | 11742 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 7.70e-34 | 3 |
melanocyte | 5.96e-23 | 10 |
melanoblast | 5.96e-23 | 10 |
pigment cell | 1.26e-16 | 14 |
sebum secreting cell | 1.55e-13 | 2 |
epithelial cell of sweat gland | 1.55e-13 | 2 |
epithelial cell of skin gland | 1.55e-13 | 2 |
acinar cell of sebaceous gland | 1.55e-13 | 2 |
ecto-epithelial cell | 4.48e-12 | 34 |
glandular epithelial cell | 6.16e-12 | 9 |
neurecto-epithelial cell | 7.40e-12 | 20 |
columnar/cuboidal epithelial cell | 5.90e-09 | 27 |
Ontology term | p-value | n |
---|---|---|
skin gland | 1.55e-13 | 2 |
epidermis gland | 1.55e-13 | 2 |
gland of integumental system | 1.55e-13 | 2 |
sebaceous gland | 1.55e-13 | 2 |
skin sebaceous gland | 1.55e-13 | 2 |
sweat gland | 1.55e-13 | 2 |
sweat gland placode | 1.55e-13 | 2 |
sebaceous gland placode | 1.55e-13 | 2 |
mucosa of oral region | 1.92e-07 | 4 |
respiratory system mucosa | 1.92e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 5.18e-08 | 14 |