FFCP PHASE1:Hg19::chr6:10417399..10417415,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:10417399..10417415,- to FFCP PHASE1:Hg19::chr6:10417399..10417415,-: NSchange) |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7020 | |EntrezGene=7020 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11742 | |HGNC=11742 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=24bp_to_ENST00000490875_5end | |||
|cluster_id=chr6:10417399..10417415,- | |||
|coexpression_cluster_id=C595 | |||
|description=CAGE_peak_32_at_TFAP2A_5end | |||
|id=chr6:10417399..10417415,- | |||
|ontology_enrichment_celltype=CL:0000066!1.94e-17!254;CL:0000622!1.42e-12!5;CL:0002150!1.24e-11!3;CL:0000861!1.24e-11!3;CL:0000150!1.16e-10!9;CL:0000154!1.75e-10!6;CL:0000148!5.77e-10!10;CL:0000541!5.77e-10!10;CL:0002077!1.08e-09!33;CL:0000317!5.09e-09!2;CL:1000448!5.09e-09!2;CL:0002308!5.09e-09!2;CL:0002140!5.09e-09!2;CL:0002322!1.89e-07!5;CL:0000147!5.32e-07!14;CL:0002159!8.19e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002567;9.10e-34;3!CL:0000148;6.19e-23;10!CL:0000147;1.30e-16;14!CL:0000317;1.29e-13;2!CL:1000448;1.29e-13;2!CL:0002308;1.29e-13;2!CL:0002140;1.29e-13;2!CL:0000150;5.52e-12;9!CL:0000710;7.54e-12;20!CL:0002077;4.90e-11;34!CL:0000075;5.98e-09;27 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,7.70e-34,3;CL:0000148,5.96e-23,10;CL:0000541,5.96e-23,10;CL:0000147,1.26e-16,14;CL:0000317,1.55e-13,2;CL:1000448,1.55e-13,2;CL:0002308,1.55e-13,2;CL:0002140,1.55e-13,2;CL:0002077,4.48e-12,34;CL:0000150,6.16e-12,9;CL:0000710,7.40e-12,20;CL:0000075,5.90e-09,27 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!2.78e-14!106;DOID:1749!2.57e-09!14;DOID:0050687!4.09e-09!143 | |||
|ontology_enrichment_disease_v019=DOID:1749;5.36e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,5.18e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.85e-25!9;UBERON:0001557!2.80e-14!19;UBERON:0008947!1.91e-09!38;UBERON:0003258!1.91e-09!38;UBERON:0001004!2.65e-09!72;UBERON:0002419!5.09e-09!2;UBERON:0007771!5.09e-09!2;UBERON:0003297!5.09e-09!2;UBERON:0001821!5.09e-09!2;UBERON:0003487!5.09e-09!2;UBERON:0001820!5.09e-09!2;UBERON:0005089!5.09e-09!2;UBERON:0005088!5.09e-09!2;UBERON:0000072!6.61e-09!46;UBERON:0000065!2.07e-07!53 | |||
|ontology_enrichment_uberon_v019=UBERON:0002419;1.29e-13;2!UBERON:0007771;1.29e-13;2!UBERON:0003297;1.29e-13;2!UBERON:0001821;1.29e-13;2!UBERON:0003487;1.29e-13;2!UBERON:0001820;1.29e-13;2!UBERON:0003343;1.86e-07;4!UBERON:0004785;1.86e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002419,1.55e-13,2;UBERON:0007771,1.55e-13,2;UBERON:0003297,1.55e-13,2;UBERON:0001821,1.55e-13,2;UBERON:0003487,1.55e-13,2;UBERON:0001820,1.55e-13,2;UBERON:0005089,1.55e-13,2;UBERON:0005088,1.55e-13,2;UBERON:0003343,1.92e-07,4;UBERON:0004785,1.92e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0.243947412259191,0.530119073285941,0,0,0.756962552626885,0,0,0,0,0,0,0.473227200159376,0.337169380156203,0.241011029883482,0.220587945464788,0.435758888184812,0.474541238222193,0,0.588664395376038,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0.179117045405697,0,0,0,0,0,0,0,0,2.29193055334967,0,1.71072446022705,0,0.901029173531752,2.00078502841405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0.902399225814824,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14853107599234,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0.295547618953547,0,0.544692317594951,0,0,0,0,0,0,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569219092059585,0,0,0.391969589657511,0.34823682632161,0.34945333648406,0,0.0967563312890851,0.438535902517113,0.492692742319255,0,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0.415440338029185,0,0.77380195455795,0,0,0,0.0524545881349981,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91502377331055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28400018965175,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62164849248911,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.06531979076442,5.13548188229369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0.243947412259191,0.530119073285941,0,0,0.756962552626885,0,0,0,0,0,0,0.473227200159376,0.337169380156203,0.241011029883482,0.220587945464788,0.435758888184812,0.474541238222193,0,0.588664395376038,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0.179117045405697,0,0,0,0,0,0,0,0,2.29193055334967,0,1.71072446022705,0,0.901029173531752,2.00078502841405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0.902399225814824,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14853107599234,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0.295547618953547,0,0.544692317594951,0,0,0,0,0,0,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569219092059585,0,0,0.391969589657511,0.34823682632161,0.34945333648406,0,0.0967563312890851,0.438535902517113,0.492692742319255,0,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0.415440338029185,0,0.77380195455795,0,0,0,0.0524545881349981,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91502377331055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28400018965175,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62164849248911,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.06531979076442,5.13548188229369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p32@TFAP2A | |||
}} | }} |
Latest revision as of 13:05, 19 September 2015
Short description: | p32@TFAP2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_32_at_TFAP2A_5end |
Coexpression cluster: | C595_teratocarcinoma_HES3GFP_H9_testicular_Wilms_hepatoblastoma_neuroblastoma |
Association with transcript: | 24bp_to_ENST00000490875_5end |
EntrezGene: | TFAP2A |
HGNC: | 11742 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 7.70e-34 | 3 |
melanocyte | 5.96e-23 | 10 |
melanoblast | 5.96e-23 | 10 |
pigment cell | 1.26e-16 | 14 |
sebum secreting cell | 1.55e-13 | 2 |
epithelial cell of sweat gland | 1.55e-13 | 2 |
epithelial cell of skin gland | 1.55e-13 | 2 |
acinar cell of sebaceous gland | 1.55e-13 | 2 |
ecto-epithelial cell | 4.48e-12 | 34 |
glandular epithelial cell | 6.16e-12 | 9 |
neurecto-epithelial cell | 7.40e-12 | 20 |
columnar/cuboidal epithelial cell | 5.90e-09 | 27 |
Ontology term | p-value | n |
---|---|---|
skin gland | 1.55e-13 | 2 |
epidermis gland | 1.55e-13 | 2 |
gland of integumental system | 1.55e-13 | 2 |
sebaceous gland | 1.55e-13 | 2 |
skin sebaceous gland | 1.55e-13 | 2 |
sweat gland | 1.55e-13 | 2 |
sweat gland placode | 1.55e-13 | 2 |
sebaceous gland placode | 1.55e-13 | 2 |
mucosa of oral region | 1.92e-07 | 4 |
respiratory system mucosa | 1.92e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 5.18e-08 | 14 |