FFCP PHASE1:Hg19::chr6:10417454..10417460,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7020 | |EntrezGene=7020 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11742 | |HGNC=11742 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-14bp_to_ENST00000490875_5end | |association_with_transcript=-14bp_to_ENST00000490875_5end | ||
|cluster_id=chr6:10417454..10417460,- | |||
|coexpression_cluster_id=C595 | |coexpression_cluster_id=C595 | ||
|description=CAGE_peak_40_at_TFAP2A_5end | |description=CAGE_peak_40_at_TFAP2A_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002150!2.97e-44!3;CL:0000861!2.97e-44!3;CL:0002322!2.72e-27!5;CL:0000148!3.25e-14!10;CL:0000541!3.25e-14!10;CL:0000235!4.24e-14!10;CL:0000147!1.90e-10!14;CL:0000710!1.33e-07!20 | |ontology_enrichment_celltype=CL:0002150!2.97e-44!3;CL:0000861!2.97e-44!3;CL:0002322!2.72e-27!5;CL:0000148!3.25e-14!10;CL:0000541!3.25e-14!10;CL:0000235!4.24e-14!10;CL:0000147!1.90e-10!14;CL:0000710!1.33e-07!20 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.87e-11;10!UBERON:0005564;2.87e-11;10 | |ontology_enrichment_development_v019=UBERON:0009117;2.87e-11;10!UBERON:0005564;2.87e-11;10 | ||
|ontology_enrichment_disease=DOID:3095!4.79e-07!22;DOID:2994!4.79e-07!22 | |ontology_enrichment_disease=DOID:3095!4.79e-07!22;DOID:2994!4.79e-07!22 | ||
|ontology_enrichment_disease_v019=DOID:3095;3.41e-19;22!DOID:2994;3.41e-19;22 | |ontology_enrichment_disease_v019=DOID:3095;3.41e-19;22!DOID:2994;3.41e-19;22 | ||
|ontology_enrichment_disease_v019_2=DOID:3095,3.41e-19,22;DOID:2994,3.41e-19,22 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000992;5.49e-09;13 | |ontology_enrichment_uberon_v019=UBERON:0000992;5.49e-09;13 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000992,5.70e-09,13 | |||
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|short_description=p40@TFAP2A | |short_description=p40@TFAP2A | ||
}} | }} |
Latest revision as of 13:06, 19 September 2015
Short description: | p40@TFAP2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_40_at_TFAP2A_5end |
Coexpression cluster: | C595_teratocarcinoma_HES3GFP_H9_testicular_Wilms_hepatoblastoma_neuroblastoma |
Association with transcript: | -14bp_to_ENST00000490875_5end |
EntrezGene: | TFAP2A |
HGNC: | 11742 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
female gonad | 5.70e-09 | 13 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 3.41e-19 | 22 |
germ cell cancer | 3.41e-19 | 22 |