FFCP PHASE1:Hg19::chr6:10521574..10521602,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:10521574..10521602,+ to FFCP PHASE1:Hg19::chr6:10521574..10521602,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2651 | |EntrezGene=2651 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4204 | |HGNC=4204 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N0V5 | |UniProt=Q8N0V5 | ||
|association_with_transcript=0bp_to_ENST00000475577,ENST00000495262_5end | |||
|cluster_id=chr6:10521574..10521602,+ | |||
|description=CAGE_peak_2_at_GCNT2_5end | |||
|id=chr6:10521574..10521602,+ | |||
|ontology_enrichment_celltype=CL:0000066!4.09e-35!254;CL:0000076!2.89e-11!62;CL:0002321!2.02e-09!248;CL:0000220!3.86e-09!246;CL:0002077!8.91e-09!33;CL:0000075!9.70e-09!27;CL:0000213!1.31e-08!57;CL:0000215!1.31e-08!57;CL:0000147!1.37e-08!14;CL:0000223!4.11e-08!59;CL:0002076!4.22e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0000147;1.30e-10;14!CL:0000039;3.49e-09;7!CL:0000586;3.49e-09;7!CL:0000148;3.16e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.46e-30,253;CL:0000147,8.70e-11,14;CL:0000039,3.51e-09,7;CL:0000586,3.51e-09,7;CL:0000223,3.80e-08,58;CL:0002321,1.29e-07,250;CL:0000148,1.97e-07,10;CL:0000541,1.97e-07,10;CL:0000213,4.31e-07,58;CL:0000215,4.31e-07,58;CL:0000076,9.90e-07,63 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!7.88e-12!106;DOID:0050687!5.45e-09!143;DOID:162!7.02e-07!235;DOID:14566!8.04e-07!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.56e-10,106;DOID:0050687,6.95e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0008947!4.48e-07!38;UBERON:0003258!4.48e-07!38;UBERON:0002113!6.00e-07!27;UBERON:0003918!6.00e-07!27;UBERON:0005095!6.00e-07!27;UBERON:0007687!6.00e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0002113;1.96e-09;24!UBERON:0011143;1.96e-09;24!UBERON:0000489;6.03e-07;29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,2.15e-08,26;UBERON:0003918,2.15e-08,26;UBERON:0011143,2.15e-08,26;UBERON:0005095,2.15e-08,26;UBERON:0007687,2.15e-08,26;UBERON:0005177,4.34e-08,101 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,3.44027511102112,0.697801167972428,0,0,0.123766352960047,0,1.34465029290355,0.602694528023977,0.730310090387373,0,0,0,0,0.572471974262113,2.6006140763848,1.50651167513763,0,0,0,0,0,0,3.67768489791571,0.30120591877825,0.739508020333575,0,0,0.880801318004542,0,0,0,0.671746422719773,0.971680998056939,0,0.145398238779565,0.755751887377619,0.727752183563449,0,0,0.309706370895104,0.28769239232215,0.512321413058201,0.945928919554341,0.344745680736619,0.645484683583826,0,0,0.818718450173537,0,0,0,0,0.989553900560148,0.997318288108159,0.852449501065388,0.290209238628584,0,0.622822248995575,0.502497330513487,1.0429658368404,0.434377689410233,0.605399502633369,0,0.316462387440884,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64342657158052,0.560508562981536,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.567208902984407,0,0.527008714158756,1.44076983047484,0.728590576585084,1.48313777113772,0.97364218096405,0.870648686496336,1.32957960518865,0,0,0,0,0.860234595106124,0.694281003215189,0.56530794192401,1.67799774483962,0.275118041940067,2.08994966536811,0.516833518338658,1.06729878806013,1.67360306382335,1.61131726843659,3.04108842287405,0.976248230192678,1.10298924103761,0.81014194788176,5.09008451219255,3.81699933464489,2.92789849256638,0,0,0.732806975721629,0,0,0,0,0,0,0,0.354668382198357,2.24271040056923,0,0.74000264525148,0,0.269421344139376,0.163461903113459,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.9910864480622,2.45471508531751,4.58887352622406,1.34171076742555,0.397589304964456,0.813357600086629,1.96956004529204,2.27088765788066,0.36497735907583,0,0,0,0,0,1.30137480043828,2.52877035117153,1.20505514941741,1.54411561825352,0.871517776369625,1.66089433377768,2.83145747136345,2.74710051175484,1.53898862778556,4.42893272774789,0,0,0,0,0,0,0,3.93563003337963,2.40194934417936,6.36551655370028,1.1240175325762,2.51322431029077,0.925884451585296,0.325808305310325,0,1.44331342025273,0.231860809950154,0.70445216541493,1.73239737313289,2.31492756288305,1.52203321787679,0,0,3.44703808522356,4.44608103764552,2.97262324577457,5.62403003920662,1.34385702559088,2.55195175036296,0,0,0,0,0,0,0.144119953416961,0,1.58744735730423,4.20187268114105,4.68869788840188,3.4214489204541,3.80461723002297,6.60754727256618,2.85826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.4546963282643,19.1737360892065,12.3966509065751,1.2162378064119,1.00451418286425,2.10833939483032,0,0,0,0,0.61642896765115,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.12269149171914,0,0.271265023699736,0.207970861530807,0.713715955188647,0.630809660135739,0.117141414992713,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,6.88898862672247,5.21316822788541,4.14364450211533,0,0,0.131124414959424,1.80479845162965,6.31525764256201,0.784349769176855,0,5.17202981575091,0,3.2317804002538,1.72732732881711,1.54227252690289,0.812839312631559,1.00337954770971,3.05851527654046,2.49322802678617,3.1342465661105,5.26223703950243,4.18296721639841,4.10320200186223,8.20036614249264,3.90454073597164,5.35813260568156,0,0,0.574265537996172,2.60024098414608,0,0,0,0,0,0,0,0,0,5.2891172915513,2.30628080838127,3.70076866234294,1.92199783625545,0,0.31481234683064,0,0,0,0,0.18532421910392,0.858749320451947,0,0.632758849437452,0.762520775695299,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0.243713489631284,0,0,0,0,0,0.66343897524122,1.75380354101505,0,0.655894752046633,0,0.30982349809975,0,0,0,0,0,0,0,0,0,1.44333169088268,0,1.08890984861323,4.89547764039252,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,5.87532391201102,0,8.33136734335508,0.185803175125719,0,0,0,9.77938920020801,0.191505370132367,0,0,0,0,0,0,4.57087800064329,0,0,0,0,0,0,0,0.781552381608161,0.278406173895242,2.46174797895425,2.43410110628385,0,5.63948020351398,0,0.439524537815682,0,3.34330152832435,0,0,0,0,0,0,0,0,0.63337622438398,1.9924798825107,0.552567831062295,1.25966373927138,0,0,0,0.179736702294654,1.43216939740487,0,0.0986434056369336,0,0,0,0,0,0,0.349839999984783,0.724999575434793,0.796554137998498,2.2882828526349,0.472775363535873,0.689486746482929,0,0,0,0,0,0,0,0,0.871507708151921,0.697118721393016,1.00035336054936,0,8.53086446235823,7.44988448601109,30.7472062539283,0,0.183195186803725,0,0,1.09886179476517,2.99181027420282,0,0.784250137270958,0.671286347903371,1.51802986179348,4.4502242114506,0.843992258112108,5.38668266925187,21.3443137865251,0,0.995261931078505,0.530745387020035,0.611030144933625,0,0,0,0,2.40773294189637,0,0,4.50028623543806,5.09838797021595,0,2.41981432097328,0,0.252746318513952,3.90840890477681,1.24425829676697,0.664653872707185,0,0.313932918407225,0,0.853828638089378,0,7.46306874841063,1.27390116638691,0.34823682632161,0.52418000472609,10.4911479807686,1.06431964417994,1.24251839046515,0.903270027585302,2.5217144286989,0,0.225980740780532,0.137041924646751,1.39100228192093,0,5.0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| 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| ||
|short_description=p2@GCNT2 | |||
}} | }} |
Latest revision as of 13:32, 19 September 2015
Short description: | p2@GCNT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GCNT2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000475577, ENST00000495262_5end |
EntrezGene: | GCNT2 |
HGNC: | 4204 |
UniProt: | Q8N0V5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.46e-30 | 253 |
pigment cell | 8.70e-11 | 14 |
germ line cell | 3.51e-09 | 7 |
germ cell | 3.51e-09 | 7 |
endodermal cell | 3.80e-08 | 58 |
embryonic cell | 1.29e-07 | 250 |
melanocyte | 1.97e-07 | 10 |
melanoblast | 1.97e-07 | 10 |
lining cell | 4.31e-07 | 58 |
barrier cell | 4.31e-07 | 58 |
squamous epithelial cell | 9.90e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
kidney | 2.15e-08 | 26 |
kidney mesenchyme | 2.15e-08 | 26 |
upper urinary tract | 2.15e-08 | 26 |
kidney rudiment | 2.15e-08 | 26 |
kidney field | 2.15e-08 | 26 |
trunk region element | 4.34e-08 | 101 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.56e-10 | 106 |
cell type cancer | 6.95e-08 | 143 |