FFCP PHASE1:Hg19::chr7:766850..766922,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54919 | |EntrezGene=54919 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26013 | |HGNC=26013 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000437419,ENST00000438961,ENST00000440747_5end | |association_with_transcript=0bp_to_ENST00000437419,ENST00000438961,ENST00000440747_5end | ||
|cluster_id=chr7:766850..766922,+ | |||
|description=CAGE_peak_3_at_HEATR2_5end | |description=CAGE_peak_3_at_HEATR2_5end | ||
|id=chr7:766850..766922,+ | |id=chr7:766850..766922,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.02e-29!254;CL:0000076!4.90e-12!62;CL:0002321!1.24e-09!248;CL:0000220!3.39e-09!246;CL:1000449!7.13e-07!16 | |ontology_enrichment_celltype=CL:0000066!1.02e-29!254;CL:0000076!4.90e-12!62;CL:0002321!1.24e-09!248;CL:0000220!3.39e-09!246;CL:1000449!7.13e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:1000449;8.41e-08;15!CL:1000497;6.35e-07;17!CL:0002518;6.35e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.30e-29,253;CL:0000076,4.48e-12,63;CL:0002321,5.28e-09,250;CL:1000449,3.46e-08,15;CL:0000213,1.38e-07,58;CL:0000215,1.38e-07,58;CL:1000497,2.79e-07,17;CL:0002518,2.79e-07,17;CL:0000223,7.35e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!2.59e-19!239;DOID:162!3.18e-19!235;DOID:0050687!3.48e-13!143;DOID:305!9.26e-12!106;DOID:0050686!2.93e-09!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.76e-17,235;DOID:14566,3.32e-17,239;DOID:0050687,2.38e-12,143;DOID:305,3.82e-11,106;DOID:0050686,1.82e-08,137 | |||
|ontology_enrichment_uberon=UBERON:0000119!2.24e-09!312;UBERON:0005177!4.39e-09!107;UBERON:0000483!4.75e-09!309;UBERON:0000481!1.17e-08!347;UBERON:0004211!7.13e-07!16;UBERON:0001285!7.13e-07!16;UBERON:0007684!7.13e-07!16;UBERON:0003220!7.13e-07!16;UBERON:0004208!7.13e-07!16 | |ontology_enrichment_uberon=UBERON:0000119!2.24e-09!312;UBERON:0005177!4.39e-09!107;UBERON:0000483!4.75e-09!309;UBERON:0000481!1.17e-08!347;UBERON:0004211!7.13e-07!16;UBERON:0001285!7.13e-07!16;UBERON:0007684!7.13e-07!16;UBERON:0003220!7.13e-07!16;UBERON:0004208!7.13e-07!16 | ||
|ontology_enrichment_uberon_v019=UBERON:0006554;3.91e-08;30!UBERON:0001008;3.91e-08;30!UBERON:0006555;8.41e-08;15!UBERON:0004819;8.41e-08;15!UBERON:0001285;8.41e-08;15!UBERON:0007684;8.41e-08;15!UBERON:0002113;9.96e-08;24!UBERON:0011143;9.96e-08;24!UBERON:0000490;4.13e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,6.89e-10,101;UBERON:0004211,3.46e-08,15;UBERON:0009773,3.46e-08,15;UBERON:0001231,3.46e-08,15;UBERON:0001285,3.46e-08,15;UBERON:0007684,3.46e-08,15;UBERON:0004208,3.46e-08,15;UBERON:0000119,2.02e-07,309;UBERON:0006555,2.89e-07,16;UBERON:0004819,2.89e-07,16;UBERON:0000483,3.11e-07,306;UBERON:0002113,5.93e-07,26;UBERON:0003918,5.93e-07,26;UBERON:0011143,5.93e-07,26;UBERON:0005095,5.93e-07,26;UBERON:0007687,5.93e-07,26 | |||
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| ||
|short_description=p3@HEATR2 | |short_description=p3@HEATR2 | ||
}} | }} |
Latest revision as of 14:10, 19 September 2015
Short description: | p3@HEATR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HEATR2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000437419, ENST00000438961, ENST00000440747_5end |
EntrezGene: | HEATR2 |
HGNC: | 26013 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.30e-29 | 253 |
squamous epithelial cell | 4.48e-12 | 63 |
embryonic cell | 5.28e-09 | 250 |
epithelial cell of nephron | 3.46e-08 | 15 |
lining cell | 1.38e-07 | 58 |
barrier cell | 1.38e-07 | 58 |
kidney cell | 2.79e-07 | 17 |
kidney epithelial cell | 2.79e-07 | 17 |
endodermal cell | 7.35e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
trunk region element | 6.89e-10 | 101 |
nephron epithelium | 3.46e-08 | 15 |
renal tubule | 3.46e-08 | 15 |
nephron tubule | 3.46e-08 | 15 |
nephron | 3.46e-08 | 15 |
uriniferous tubule | 3.46e-08 | 15 |
nephrogenic mesenchyme | 3.46e-08 | 15 |
cell layer | 2.02e-07 | 309 |
excretory tube | 2.89e-07 | 16 |
kidney epithelium | 2.89e-07 | 16 |
epithelium | 3.11e-07 | 306 |
kidney | 5.93e-07 | 26 |
kidney mesenchyme | 5.93e-07 | 26 |
upper urinary tract | 5.93e-07 | 26 |
kidney rudiment | 5.93e-07 | 26 |
kidney field | 5.93e-07 | 26 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.76e-17 | 235 |
disease of cellular proliferation | 3.32e-17 | 239 |
cell type cancer | 2.38e-12 | 143 |
carcinoma | 3.82e-11 | 106 |
organ system cancer | 1.82e-08 | 137 |