FFCP PHASE1:Hg19::chr17:34308555..34308560,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6360 | |EntrezGene=6360 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10614 | |HGNC=10614 | ||
|TSSclassifier=strong | |||
|UniProt=O15467 | |UniProt=O15467 | ||
|association_with_transcript=-23bp_to_ENST00000293275_5end | |||
|cluster_id=chr17:34308555..34308560,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_3_at_CCL16_5end | |||
|id=chr17:34308555..34308560,- | |||
|ontology_enrichment_celltype=CL:0000181!6.33e-22!12;CL:0000417!6.33e-22!12;CL:0000668!6.33e-22!12;CL:0000414!6.33e-22!12;CL:0000412!6.33e-22!12;CL:0000182!6.33e-22!12;CL:0002563!2.43e-08!4;CL:0000223!3.70e-08!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.94e-14;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.75e-14,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!2.94e-24!19;UBERON:0006925!2.94e-24!19;UBERON:0008836!2.94e-24!19;UBERON:0008835!4.86e-21!22;UBERON:0003894!4.86e-21!22;UBERON:0009854!3.75e-20!23;UBERON:0007499!1.37e-18!25;UBERON:0009497!1.37e-18!25;UBERON:0000015!1.37e-18!25;UBERON:0002423!1.37e-18!25;UBERON:0006235!1.37e-18!25;UBERON:0004161!1.37e-18!25;UBERON:0005057!6.73e-18!26;UBERON:0009856!6.73e-18!26;UBERON:0002365!4.18e-15!31;UBERON:0002330!4.18e-15!31;UBERON:0002368!1.92e-13!35;UBERON:0003929!2.01e-13!54;UBERON:0000949!1.44e-10!45;UBERON:0005911!6.01e-09!82;UBERON:0005172!9.93e-09!55;UBERON:0005173!9.93e-09!55;UBERON:0001242!2.43e-08!4;UBERON:0001262!2.43e-08!4;UBERON:0004786!2.43e-08!4;UBERON:0004808!2.43e-08!4;UBERON:0001277!2.43e-08!4;UBERON:0002530!3.63e-08!59;UBERON:0002417!6.51e-08!61;UBERON:0000916!6.51e-08!61;UBERON:0003350!6.39e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.58e-19;19!UBERON:0006925;1.58e-19;19!UBERON:0002423;4.61e-15;25!UBERON:0002365;1.07e-12;31!UBERON:0002330;1.07e-12;31!UBERON:0002368;3.89e-10;33!UBERON:0000949;1.01e-08;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.58e-19,19;UBERON:0006925,1.58e-19,19;UBERON:0008836,1.58e-19,19;UBERON:0008835,5.41e-17,22;UBERON:0003894,5.41e-17,22;UBERON:0009854,2.71e-16,23;UBERON:0007499,4.61e-15,25;UBERON:0009497,4.61e-15,25;UBERON:0000015,4.61e-15,25;UBERON:0002423,4.61e-15,25;UBERON:0006235,4.61e-15,25;UBERON:0004161,4.61e-15,25;UBERON:0009856,1.62e-14,26;UBERON:0002365,2.58e-12,31;UBERON:0002330,2.58e-12,31;UBERON:0002368,5.30e-11,35;UBERON:0000949,9.88e-09,45;UBERON:0003929,2.12e-07,54;UBERON:0005172,2.12e-07,54;UBERON:0005173,2.12e-07,54;UBERON:0002530,7.84e-07,59;UBERON:0002417,9.92e-07,60;UBERON:0000916,9.92e-07,60 | |||
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|short_description=p3@CCL16 | |||
}} | }} |
Latest revision as of 16:06, 19 September 2015
Short description: | p3@CCL16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CCL16_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -23bp_to_ENST00000293275_5end |
EntrezGene: | CCL16 |
HGNC: | 10614 |
UniProt: | O15467 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.75e-14 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 1.58e-19 | 19 |
digestive gland | 1.58e-19 | 19 |
liver bud | 1.58e-19 | 19 |
hepatic diverticulum | 5.41e-17 | 22 |
liver primordium | 5.41e-17 | 22 |
digestive tract diverticulum | 2.71e-16 | 23 |
epithelial sac | 4.61e-15 | 25 |
epithelium of foregut-midgut junction | 4.61e-15 | 25 |
anatomical boundary | 4.61e-15 | 25 |
hepatobiliary system | 4.61e-15 | 25 |
foregut-midgut junction | 4.61e-15 | 25 |
septum transversum | 4.61e-15 | 25 |
sac | 1.62e-14 | 26 |
exocrine gland | 2.58e-12 | 31 |
exocrine system | 2.58e-12 | 31 |
endocrine gland | 5.30e-11 | 35 |
endocrine system | 9.88e-09 | 45 |
gut epithelium | 2.12e-07 | 54 |
abdomen element | 2.12e-07 | 54 |
abdominal segment element | 2.12e-07 | 54 |
gland | 7.84e-07 | 59 |
abdominal segment of trunk | 9.92e-07 | 60 |
abdomen | 9.92e-07 | 60 |