FFCP PHASE1:Hg19::chr12:59314346..59314367,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:59314346..59314367,-
|short_description=p6@LRIG3
|description=CAGE_peak_6_at_LRIG3_5end
|association_with_transcript=-43bp_to_ENST00000320743_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=121227 | |EntrezGene=121227 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30991 | |HGNC=30991 | ||
|TSSclassifier=strong | |||
|UniProt=Q6UXM1 | |UniProt=Q6UXM1 | ||
|association_with_transcript=-43bp_to_ENST00000320743_5end | |||
|cluster_id=chr12:59314346..59314367,- | |||
|description=CAGE_peak_6_at_LRIG3_5end | |||
|id=chr12:59314346..59314367,- | |||
|ontology_enrichment_celltype=CL:0000066!2.96e-19!254;CL:0002076!7.08e-10!43;CL:0000223!3.65e-09!59;CL:0002251!6.69e-07!21 | |||
|ontology_enrichment_celltype_v019=CL:0002251;7.73e-09;20!CL:0002076;1.94e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.38e-09,253;CL:0002076,7.62e-09,42;CL:0002251,1.54e-08,20;CL:0000223,4.00e-08,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!6.65e-15!143;DOID:305!6.00e-12!106;DOID:162!5.88e-08!235;DOID:14566!2.16e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:3095;2.62e-08;22!DOID:2994;2.62e-08;22!DOID:1749;3.69e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,1.58e-11,143;DOID:305,7.92e-09,106;DOID:1749,1.34e-08,14;DOID:3095,2.15e-08,22;DOID:2994,2.15e-08,22;DOID:162,2.14e-07,235;DOID:14566,6.03e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.87e-15!169;UBERON:0000925!1.87e-15!169;UBERON:0006595!1.87e-15!169;UBERON:0001007!3.70e-13!155;UBERON:0001555!3.70e-13!155;UBERON:0007026!3.70e-13!155;UBERON:0003102!3.04e-09!95;UBERON:0000468!3.83e-09!659;UBERON:0004921!2.11e-08!129;UBERON:0004185!2.11e-08!129;UBERON:0000161!5.59e-08!35;UBERON:0000481!1.50e-07!347;UBERON:0000165!2.01e-07!28;UBERON:0000930!2.01e-07!28;UBERON:0000166!4.66e-07!21;UBERON:0000077!5.14e-07!130;UBERON:0001004!5.24e-07!72;UBERON:0001444!9.26e-07!48 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;7.55e-08;17!UBERON:0000974;1.58e-07;6!UBERON:0000059;1.74e-07;11!UBERON:0000344;1.84e-07;20!UBERON:0000922;3.17e-07;49!UBERON:0004921;5.19e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.95e-08,160;UBERON:0000925,2.95e-08,160;UBERON:0006595,2.95e-08,160;UBERON:0001007,1.02e-07,145;UBERON:0001555,1.02e-07,145;UBERON:0007026,1.02e-07,145;UBERON:0000160,1.07e-07,17;UBERON:0000344,1.20e-07,20;UBERON:0000059,3.03e-07,11 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0.422863212287913,0,0,0,0,0,0.261185628199839,0,0.697801167972428,0.873765488520689,0.263766978228454,0.495065411840187,0.662794751455832,0,0,0.730310090387373,0,0.246242116153576,0.816002764977012,0,1.71741592278634,0.136874425072884,0.87879847716362,0.305653622991805,0.410502947249729,0.314843125254717,0,0,0,1.83884244895785,0.30120591877825,0,0.852139206383318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0.361439152384566,0.50133791063589,0.144846518960824,0,0,0.378139268656271,0.443458794925128,1.31752178539689,0.785874452986276,0.364295288292542,0.741568885568859,0,0,0,0,0,0,0.993812036833525,0,0.694281003215189,1.69592382577203,0.838998872419812,0.825354125820202,0.417989933073621,1.03366703667732,0.35576626268671,0.66944122552934,0,0,1.70843440283719,0.367663080345869,0,0.892997282840798,1.34717623575702,2.0270066486998,0,0,0.732806975721629,0,0,0.872188104285069,0.496971951695318,0,0.132409180813219,0.573673241497627,0.354668382198357,0.560677600142307,0,0.74000264525148,0,0.269421344139376,0.653847612453835,0.605429710579726,0,0,0.936480230490962,0.570471821544449,0.448346041655403,0.704606991862589,0.647491777472526,0.561803226808994,0.204154171254893,0.491337269247072,0.723280468230358,3.56400857184616,1.7308685049499,0,0,0.505008341862199,0.875829639103749,0.277064115484183,0.877955241761676,0,1.05166641234618,0.340296549480063,0.358779271377724,1.2813443329114,1.90738711043606,0.600182192168805,0.515262646192195,0.772921620136887,0.18611685633159,0.843881661206331,0.0974370051611986,1.7670364197088,0.736399189138395,0.969876340912871,0.710019185033229,0.10075209822764,0.67824236924195,0.386521706326594,1.09098448236334,0.573609190778008,0.609868530647977,1.06023814657188,1.74290914304278,1.34759371519982,1.00928340350251,1.82488679537915,0,0.643240938192885,0,0.928735856063958,0.721879481669586,0.473227200159376,0.842923450390509,0.723033089650446,0.441175890929576,0.217879444092406,0.949082476444386,0,0.392442930250692,0.38474715694639,0.738155454624648,0,0,0,1.26755034821831,0,0,2.20731549707325,1.72183813960359,0.514703430895577,0.658501712451753,2.24803506515239,1.3068766413512,1.75918045801206,0.325808305310325,0,1.44331342025273,0.34779121492523,0.352226082707465,0.433099343283221,0.925971025153221,0.570762456703795,0.790204397959275,0,0,0,0,0,0.671928512795438,0.708875486211932,0.447792613514241,0.581267877027924,2.30029607499127,0,0,0,0,0,0.507983154337352,0.763976851116555,0,0,0.616964956219941,0,0.285826432630578,0.784917590417525,0,0.66004457238855,0.129271715757778,3.57656445851882,0,0.26593811658487,1.04007436911366,0,0,0.799266537048298,0.714889968290738,0.542621605391443,0,0,0,0.791951872933429,0.602878754119172,0,0,0,0,0,0.718874566474748,1.14861935834114,1.42636905040718,0.289562613335158,0.61642896765115,0,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0.36807447515742,0,0.542530047399471,0.415941723061614,0.535286966391485,1.10391690523754,0.585707074963566,0.601892199455438,0,0,0.664225598535437,0.737476674166813,0.60818530127658,0.195801157462741,0.343143423810856,0,0,0,0.909382714338778,0,0.604780586659361,0,0.767309866440312,0.280660094433074,0,0,0.321707842287215,0,0.462629081407967,0,0.164254312027618,0,0.116210378459959,2.29632954224082,0.601519410909855,0.552485933615378,0.68888668898764,0,0.393373244878272,0,1.38627606787947,0,1.46139224653261,1.37217117560738,1.13733384070897,0.340187410553031,0.863663664408557,1.54227252690289,0.812839312631559,0,1.01950509218015,0,0.671624264166535,0.219259876645935,0.261435451024901,0.512900250232778,0.656029291399411,0,1.03041011647722,2.1060976908219,2.14524699793529,0.574265537996172,0.650060246036521,0,0.386682873168488,0.924291702687866,0.614014698904518,0,0.966782203814463,0.145016693914229,0.681813019328807,0.356128142586949,0.661139661443912,0.960950336825531,3.57315594984836,1.92199783625545,0,0,0,0,0,0,0,0.143124886741991,0.372158369359667,0.632758849437452,0.38126038784765,0.511795582622668,0.855877976067841,1.27281299170375,0,1.2591072030832,1.37268514868027,0.942499218765491,0,0,0,0,0.243713489631284,0,0.545999645631943,0.565621727814851,0,0,0,0.438450885253763,0,0,0,0.30982349809975,0,0.860468113224309,0.982490410131212,0,0.354761064070598,0,0.658589785919804,0.379473173765715,0.349934720244983,1.15466535270614,0.670302275535787,1.08890984861323,0.847294206991012,0,3.36942951335251,0.886860307073351,0.459446800413919,0,0,0,0,0,0,0,0,0.213648142254946,0,0.980160863924127,0,0,0,0.956557636372934,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,1.4098700508785,0.37428108081644,0,0,2.34031106982705,0.568272293612826,0.47748896947538,0.890894042497916,0.614321404198464,0,0.140669416410513,1.33570446027487,0,4.01138275443188,0.796991953004279,0.552567831062295,1.51159648712566,0.8181494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| ||
|short_description=p6@LRIG3 | |||
}} | }} |
Latest revision as of 17:18, 19 September 2015
Short description: | p6@LRIG3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_LRIG3_5end |
Coexpression cluster: | NA |
Association with transcript: | -43bp_to_ENST00000320743_5end |
EntrezGene: | LRIG3 |
HGNC: | 30991 |
UniProt: | Q6UXM1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.38e-09 | 253 |
endo-epithelial cell | 7.62e-09 | 42 |
epithelial cell of alimentary canal | 1.54e-08 | 20 |
endodermal cell | 4.00e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 2.95e-08 | 160 |
endoderm | 2.95e-08 | 160 |
presumptive endoderm | 2.95e-08 | 160 |
digestive system | 1.02e-07 | 145 |
digestive tract | 1.02e-07 | 145 |
primitive gut | 1.02e-07 | 145 |
intestine | 1.07e-07 | 17 |
mucosa | 1.20e-07 | 20 |
large intestine | 3.03e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 1.58e-11 | 143 |
carcinoma | 7.92e-09 | 106 |
squamous cell carcinoma | 1.34e-08 | 14 |
germ cell and embryonal cancer | 2.15e-08 | 22 |
germ cell cancer | 2.15e-08 | 22 |
cancer | 2.14e-07 | 235 |
disease of cellular proliferation | 6.03e-07 | 239 |