FFCP PHASE1:Hg19::chr11:67124405..67124419,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57804 | |EntrezGene=57804 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14106 | |HGNC=14106 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=23bp_to_ENST00000532830_5end | |association_with_transcript=23bp_to_ENST00000532830_5end | ||
|cluster_id=chr11:67124405..67124419,- | |||
|coexpression_cluster_id=C133 | |coexpression_cluster_id=C133 | ||
|description=CAGE_peak_13_at_POLD4_5end | |description=CAGE_peak_13_at_POLD4_5end | ||
|id=chr11:67124405..67124419,- | |id=chr11:67124405..67124419,- | ||
|ontology_enrichment_celltype=CL:0000945!3.77e-12!24;CL:0000826!3.77e-12!24 | |ontology_enrichment_celltype=CL:0000945!3.77e-12!24;CL:0000826!3.77e-12!24 | ||
|ontology_enrichment_celltype_v019=CL:0002178;1.12e-17;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,1.12e-17,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060058!1.12e-09!10 | |ontology_enrichment_disease=DOID:0060058!1.12e-09!10 | ||
|ontology_enrichment_disease_v019=DOID:3493;4.32e-26;2!DOID:299;5.49e-09;25 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,4.32e-26,2;DOID:299,5.49e-09,25 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002394;1.00e-13;4!UBERON:0003928;1.00e-13;4!UBERON:0002108;3.26e-11;4!UBERON:0000945;3.60e-11;5!UBERON:0010039;3.60e-11;5!UBERON:0005409;1.22e-09;22!UBERON:0002294;2.03e-08;7!UBERON:0001173;2.03e-08;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,3.26e-11,4;UBERON:0002394,1.32e-09,6;UBERON:0003928,1.32e-09,6;UBERON:0005409,1.20e-08,25;UBERON:0000945,1.80e-07,8;UBERON:0010039,1.80e-07,8;UBERON:0002294,7.91e-07,9;UBERON:0001173,7.91e-07,9;UBERON:0004912,7.91e-07,9 | |||
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| ||
|short_description=p13@POLD4 | |short_description=p13@POLD4 | ||
}} | }} |
Latest revision as of 17:34, 19 September 2015
Short description: | p13@POLD4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_POLD4_5end |
Coexpression cluster: | C133_signet_gall_small_kidney_colon_ductal_adenocarcinoma |
Association with transcript: | 23bp_to_ENST00000532830_5end |
EntrezGene: | POLD4 |
HGNC: | 14106 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 1.12e-17 | 3 |
Ontology term | p-value | n |
---|---|---|
small intestine | 3.26e-11 | 4 |
bile duct | 1.32e-09 | 6 |
digestive system duct | 1.32e-09 | 6 |
gastrointestinal system | 1.20e-08 | 25 |
stomach | 1.80e-07 | 8 |
food storage organ | 1.80e-07 | 8 |
biliary system | 7.91e-07 | 9 |
biliary tree | 7.91e-07 | 9 |
biliary bud | 7.91e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 4.32e-26 | 2 |
adenocarcinoma | 5.49e-09 | 25 |