FFCP PHASE1:Hg19::chr18:47721315..47721430,-: Difference between revisions
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=4645 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=7603 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q9ULV0,Q7Z7A5,Q9H6Y6 | ||
|association_with_transcript=20bp_to_ENST00000285039,NM_001080467,uc002leb.2_5end | |association_with_transcript=20bp_to_ENST00000285039,NM_001080467,uc002leb.2_5end | ||
|cluster_id=chr18:47721315..47721430,- | |cluster_id=chr18:47721315..47721430,- |
Latest revision as of 18:07, 19 September 2015
Short description: | p1@MYO5B |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MYO5B_5end |
Coexpression cluster: | NA |
Association with transcript: | 20bp_to_ENST00000285039, NM_001080467, uc002leb.2_5end |
EntrezGene: | MYO5B |
HGNC: | 7603 |
UniProt: | Q9ULV0Q7Z7A5Q9H6Y6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@MYO5B |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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epithelial cell | 1.34e-27 | 253 |
endodermal cell | 1.07e-19 | 58 |
endo-epithelial cell | 2.01e-17 | 42 |
epithelial cell of alimentary canal | 9.35e-09 | 20 |
respiratory epithelial cell | 1.10e-08 | 13 |
epithelial cell of lung | 9.78e-08 | 19 |
Showing 1 to 6 of 6 entries
Ontology term | p-value | n |
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endoderm-derived structure | 3.29e-34 | 160 |
endoderm | 3.29e-34 | 160 |
presumptive endoderm | 3.29e-34 | 160 |
subdivision of digestive tract | 1.90e-32 | 118 |
digestive system | 1.01e-30 | 145 |
digestive tract | 1.01e-30 | 145 |
primitive gut | 1.01e-30 | 145 |
foregut | 2.50e-24 | 87 |
respiratory system | 5.74e-20 | 74 |
trunk region element | 2.61e-17 | 101 |
Showing 1 to 10 of 52 entries
Ontology term | p-value | n |
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carcinoma | 7.28e-21 | 106 |
cell type cancer | 2.45e-13 | 143 |
adenocarcinoma | 6.57e-10 | 25 |
Showing 1 to 3 of 3 entries