FFCP PHASE1:Hg19::chr5:112540260..112540276,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4163 | |EntrezGene=4163 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6935 | |HGNC=6935 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000511847_5end | |||
|cluster_id=chr5:112540260..112540276,- | |||
|description=CAGE_peak_12_at_MCC_5end | |||
|id=chr5:112540260..112540276,- | |||
|ontology_enrichment_celltype=CL:0002251!2.42e-08!21;CL:0002076!6.32e-08!43;CL:0000223!8.33e-08!59 | |||
|ontology_enrichment_celltype_v019=CL:0000575;2.31e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000575,2.15e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!1.35e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;8.69e-17;14!DOID:3151;8.63e-16;1!DOID:3149;8.63e-16;1!DOID:3451;1.50e-08;2!DOID:4159;1.50e-08;2!DOID:0060122;1.50e-08;2!DOID:1909;2.31e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,9.82e-17,14;DOID:3151,8.63e-16,1;DOID:3149,8.63e-16,1;DOID:3451,1.50e-08,2;DOID:4159,1.50e-08,2;DOID:0060122,1.50e-08,2;DOID:1909,2.31e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.35e-28!115;UBERON:0001049!2.35e-27!57;UBERON:0005068!2.35e-27!57;UBERON:0006241!2.35e-27!57;UBERON:0007135!2.35e-27!57;UBERON:0000033!4.57e-26!123;UBERON:0000153!3.37e-25!129;UBERON:0007811!3.37e-25!129;UBERON:0004121!2.46e-24!169;UBERON:0000924!2.30e-23!173;UBERON:0006601!2.30e-23!173;UBERON:0001017!4.44e-23!82;UBERON:0005743!6.38e-23!86;UBERON:0002616!2.00e-22!59;UBERON:0000073!2.11e-22!94;UBERON:0001016!2.11e-22!94;UBERON:0000955!9.79e-22!69;UBERON:0006238!9.79e-22!69;UBERON:0003075!1.03e-20!86;UBERON:0007284!1.03e-20!86;UBERON:0002346!2.78e-19!90;UBERON:0002020!5.53e-18!34;UBERON:0003528!5.53e-18!34;UBERON:0001893!8.57e-18!34;UBERON:0002780!5.10e-17!41;UBERON:0001890!5.10e-17!41;UBERON:0006240!5.10e-17!41;UBERON:0002791!1.07e-16!33;UBERON:0003080!1.85e-16!42;UBERON:0001869!2.04e-15!32;UBERON:0002619!5.95e-13!22;UBERON:0003076!7.24e-13!15;UBERON:0003057!7.24e-13!15;UBERON:0001950!2.00e-12!20;UBERON:0000161!9.11e-12!35;UBERON:0003056!1.05e-11!61;UBERON:0004111!2.03e-11!241;UBERON:0000956!5.29e-11!25;UBERON:0000203!5.29e-11!25;UBERON:0004733!5.52e-11!12;UBERON:0002028!5.52e-11!12;UBERON:0007277!5.52e-11!12;UBERON:0004732!5.60e-10!13;UBERON:0000166!1.07e-09!21;UBERON:0002680!1.38e-09!9;UBERON:0001895!1.38e-09!9;UBERON:0010092!1.38e-09!9;UBERON:0000475!2.82e-09!365;UBERON:0002308!4.16e-09!9;UBERON:0000125!4.16e-09!9;UBERON:0001872!5.19e-09!5;UBERON:0000477!3.15e-08!286;UBERON:0000165!9.42e-08!28;UBERON:0000930!9.42e-08!28;UBERON:0002298!1.13e-07!8;UBERON:0000064!2.32e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0003343;1.66e-15;4!UBERON:0004785;1.66e-15;4!UBERON:0000974;1.18e-10;6!UBERON:0002148;2.31e-08;2!UBERON:0006331;2.31e-08;2!UBERON:0009662;2.31e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,1.66e-15,4;UBERON:0004785,1.66e-15,4;UBERON:0002148,2.48e-08,2;UBERON:0006331,2.48e-08,2;UBERON:0009662,2.48e-08,2;UBERON:0000974,9.76e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738726348460727,0,0.940364164434263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,1.48313777113772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0.206651562351531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0.590789906681404,0,0,0,0.658501712451753,0,0.100528972411631,0.277765335475589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.567100388969546,0,0,0.383382679165211,0,0,0,0,0,0.190493682876507,0.381988425558278,0,0,0.308482478109971,0.300343057843917,0.571652865261156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,1.20303882181971,0.368323955743585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0.495854746082934,0.192190067365106,1.78657797492418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0,0,0.376575203107117,0.43050537267123,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,1.22520107990516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.703347082052564,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0.969332746095218,0.185536196323703,0,0,0,0,0.227586896570999,0,0,0.344743373241465,0.291604613383254,0.173624994933292,0,0.844175070377856,0,0.331737779793674,0.295547618953547,0.219385397153973,0,0.139423744278603,0.230850775511391,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606610196826093,0,0.468528891450678,0,0,0,0.394584402849391,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0.979923974143776,0.0870592065804026,0.17472666824203,0,0,0,0,0.387956065953678,0,0.225980740780532,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.547621515567972,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0.0824158583811665,0,0,0,0,0.544813624446302,0,0,0,0.2249738915515,0,0.364497339948148,3.01891218839339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339936274560377,0.439656701034247,0,0.387848869084652,1.3223260174269,0,0,0,0,0,0,0,0,7.021753835472,0,0,0,0,0,0,0.122026264901963,0.250381861413,0,0.110929051536852,0.620964029413834,0.553394539744923,0,1.36484205787483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0.245772908753719,0,0,0,0.172214979660816,0,0,0.139879507719444,0,0.511577485214607,0,0,2.83945059299236,0,0,0,0,0,0,0,0,0,0.256916900385838,0,0.319267718114302,0,0,0.207471757392654,0.807378228159255,0,4.6129427695482,0,4.58571496304198,0.462102664601353,0,0,0,0,0,0,0,0,0,0.270150338473579,1.56215619722769,0.206686796501184,0.507326481551255,0.546974809018219,0,0,0,0.255524855279191,0,0,0,0,0,0,0,0.747667062745149,0.263091094251396,0,0,0.706437835654626,0.314231179832004,0,0,0,0,0.571812353413251,0,0,0,0,0.62164849248911,0.6828739083758,0.691259661814092,0,0,0,0.846774100381858,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,1.48523200163543,0,0,0,0,0,0.71421575442263,0,0,0,0,0.286679166302903,0,0.271965960763659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413731983447581,0,0,0.0645889098360061,0,0,0,0,0.653150243690884,0,0.202056159043763,0.0717222053926763,0,0.0814032686109745,0,0,0,0,0.122241444182866,0,0.665756774185513,0.201273793591026,0 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| ||
|short_description=p12@MCC | |||
}} | }} |
Latest revision as of 18:44, 19 September 2015
Short description: | p12@MCC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_MCC_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000511847_5end |
EntrezGene: | MCC |
HGNC: | 6935 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
corneal epithelial cell | 2.15e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 1.66e-15 | 4 |
respiratory system mucosa | 1.66e-15 | 4 |
locus ceruleus | 2.48e-08 | 2 |
brainstem nucleus | 2.48e-08 | 2 |
hindbrain nucleus | 2.48e-08 | 2 |
neck | 9.76e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 9.82e-17 | 14 |
skin squamous cell carcinoma | 8.63e-16 | 1 |
keratoacanthoma | 8.63e-16 | 1 |
skin carcinoma | 1.50e-08 | 2 |
skin cancer | 1.50e-08 | 2 |
integumentary system cancer | 1.50e-08 | 2 |
melanoma | 2.31e-08 | 2 |