FFCP PHASE1:Hg19::chr6:109776788..109776819,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:109776788..109776819,-
|short_description=p5@MICAL1
|description=CAGE_peak_5_at_MICAL1_5end
|association_with_transcript=28bp_to_ENST00000456101_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=64780 | |EntrezGene=64780 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20619 | |HGNC=20619 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=28bp_to_ENST00000456101_5end | |||
|cluster_id=chr6:109776788..109776819,- | |||
|coexpression_cluster_id=C179 | |||
|description=CAGE_peak_5_at_MICAL1_5end | |||
|id=chr6:109776788..109776819,- | |||
|ontology_enrichment_celltype=CL:0000738!6.21e-18!140;CL:0000838!1.35e-16!52;CL:0000542!3.39e-16!53;CL:0000051!3.39e-16!53;CL:0002087!1.25e-14!119;CL:0000945!2.30e-13!24;CL:0000826!2.30e-13!24;CL:0002031!1.02e-12!124;CL:0000037!5.29e-11!172;CL:0000566!5.29e-11!172;CL:0000988!2.29e-10!182;CL:0002032!9.35e-10!165;CL:0000837!9.35e-10!165;CL:0000236!4.07e-09!14;CL:0000791!4.78e-07!18;CL:0000789!4.78e-07!18;CL:0002420!4.78e-07!18;CL:0002419!4.78e-07!18;CL:0000790!4.78e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000945;9.18e-20;24!CL:0000542;1.05e-12;53!CL:0000236;9.87e-12;13!CL:0000094;2.01e-09;8!CL:0000791;8.19e-09;18!CL:0000789;8.19e-09;18!CL:0002419;8.19e-09;18!CL:0000081;4.97e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,5.21e-24,52;CL:0000542,2.79e-23,53;CL:0000051,2.79e-23,53;CL:0000738,5.85e-20,136;CL:0000945,9.36e-20,24;CL:0000826,9.36e-20,24;CL:0002087,3.76e-15,115;CL:0000037,3.87e-13,168;CL:0002031,5.39e-13,120;CL:0000236,1.94e-12,14;CL:0000988,4.15e-12,177;CL:0002032,2.92e-11,161;CL:0000837,2.92e-11,161;CL:0000094,1.04e-09,8;CL:0000791,4.44e-09,18;CL:0000789,4.44e-09,18;CL:0002420,4.44e-09,18;CL:0002419,4.44e-09,18;CL:0000790,4.44e-09,18;CL:0000081,2.98e-08,11 | |||
|ontology_enrichment_development_v019=CL:0000051;1.05e-12;53!CL:0000790;8.19e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.363356758541113,0.428201047781966,0.281908808191942,0,0,0.872338524100369,0,0,0,0.737201809504527,1.39560233594486,0.655324116390517,1.05506791291381,0,0,0,0,0,0.487932798790507,0,1.83600622119828,0,0,0.547497700291537,0.251085279189606,3.05653622991805,2.79142004129816,2.51874500203774,5.50709987588466,1.91914699048606,3.40595471295367,0,0.30120591877825,0.739508020333575,2.01414721508784,1.13735385989937,1.17440175733939,1.10799081706375,1.60435557976113,0.868043482863407,0,0.647787332037959,0,0.436194716338694,1.88937971844405,1.4555043671269,0.464858073811369,0,0.309706370895104,0.28769239232215,0.512321413058201,0.709446689665756,1.03423704220986,0.645484683583826,0,0.752969358170419,0.818718450173537,0.449446968890169,0.918251677112708,1.28371610830437,0.639337125799041,0.659702600373432,0.797854630486527,0,0.290209238628584,1.70215567407342,0,1.00499466102697,0.521482918420201,0.434377689410233,0,2.20966581592539,0.632924774881769,1.90129757680748,4.46469029926591,1.46761051855863,0.786300418025466,0.300353785683013,0.803627933485401,2.85012743741249,1.79025009479181,2.37463399894024,12.3197371122926,9.28435639145624,8.89509253863555,6.40095333849761,12.0118796110804,7.47178171940828,13.2208974556972,3.81621501814146,26.7530095481441,26.4256735216922,19.4959346343867,0,1.68152568894461,0,1.7703879310245,1.57204305099666,3.49522548299166,2.17342444007882,2.93330039970231,1.4203434172042,3.89653456815823,2.45103005147382,2.65145316727353,1.55073726208535,3.24964636518019,2.68991771423918,4.55207716459574,1.64437904603676,4.42160028457357,2.31842468588042,1.18629250529648,0,3.1360657141493,1.58633079776593,0,1.37450978193052,1.77113784413652,2.22995790026868,1.30216690771284,0.950452044448374,0.301150238155546,1.27986611154418,3.74792179657038,2.60454977248419,0.821127996921047,4.63695509416885,5.08136371988664,2.60683926989038,0,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.263504357079378,0.392937226493138,0,0.370784442784429,0.649094787309367,0.696518949197069,0.664789802594326,1.66943437013739,0,2.60020250930695,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0.0892997282840798,0,0,1.53316637465883,0,0,6.58902087180316,3.87780264148325,0,0.993943903390637,0.379891534993739,1.32409180813219,4.01571269048339,1.06400514659507,0,1.06748995729705,0,0,0.808264032418128,0,0,0,0.468642863667593,0,0,0,0.23486899728753,0.161872944368132,0.140450806702248,0,0.368502951935304,0.103325781175765,0,0.247266929278557,0,1.43723628363248,0,0.125118519871964,0.554128230968366,0,0,0,0.113432183160021,3.58779271377724,0.427114777637135,0,2.70081986475962,0.206105058476878,2.83404594050192,0.744467425326359,3.71307930930786,0.584622030967192,2.27190396819703,0.736399189138395,0.646584227275248,3.90510551768276,0.201504196455281,0.508681776931463,1.54608682530637,1.09098448236334,0.286804595389004,0.365921118388786,0.530119073285941,0.232387885739037,0.310983165046111,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0.8231480226628,0,0,0,0,0.441463099414651,0.245976877086227,0,0.658501712451753,0,0.201057944823262,0.370353780634118,0.325808305310325,3.11980435583874,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0.468008530278475,0,0.93733833986777,0.503946384596579,0.567100388969546,0.806026704325635,0.871901815541886,0.383382679165211,0,0,0.829312462163088,0.144119953416961,0.12624243342638,0.126995788584338,0,2.34434894420094,0,0.102827492703324,0.600686115687835,1.42913216315289,0.112131084345361,0.87192013766656,0.07333828582095,0.129271715757778,0,0.845302752556,1.06375246633948,0,0,1.41849132023278,0,1.00084595560703,0.542621605391443,2.46972101034231,0,0.355391948742546,0,0,0,0.599837947092342,0,0,0,0.479249710983165,3.44585807502342,0,0.434343920002738,0.205476322550383,0.358121926479791,2.69004345584465,5.12279976525011,3.01878604803324,3.33691894327346,0.254094624222463,2.60279707715243,0.773288812777695,0.670065061337395,0.637938751653163,5.24304916763028,5.9832291840805,2.48649308061621,0,0,0,1.03985430765404,0.356857977594324,0.157702415033935,0.234282829985426,0,0,0,0.664225598535437,0,0.521301686808497,0.391602314925481,0,3.10152039184331,3.66714141391649,3.62873696531711,0.303127571446259,1.66435439510497,0.604780586659361,1.48864684691266,2.76231551918512,0.561320188866147,0.640695746278505,3.07024349440022,0.482561763430822,0,0.154209693802656,0,0.246381468041427,0,0.464841513839837,0,0.200506470303285,0.184161977871793,0.34444334449382,0.546273504020151,0.393373244878272,1.80479845162965,0.462092022626489,0,1.46139224653261,0.422206515571503,0,0,0.215915916102139,0,0.541892875087706,0.501689773854853,0,0,0.447749509444357,0,0.261435451024901,0,0.328014645699706,0.976135183992909,0.103041011647722,0.0915694648183434,0.082509499920588,1.14853107599234,0.650060246036521,0,1.54673149267395,0,0.15350367472613,0.137836572484531,0.214840489736547,0.145016693914229,0.0852266274161009,0.534192213880424,1.65284915360978,2.30628080838127,3.1903178123646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| ||
|short_description=p5@MICAL1 | |||
}} | }} |
Latest revision as of 18:45, 19 September 2015
Short description: | p5@MICAL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_MICAL1_5end |
Coexpression cluster: | C179_CD19_Peripheral_lymphoma_blood_lymph_spleen_tonsil |
Association with transcript: | 28bp_to_ENST00000456101_5end |
EntrezGene: | MICAL1 |
HGNC: | 20619 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 5.21e-24 | 52 |
lymphocyte | 2.79e-23 | 53 |
common lymphoid progenitor | 2.79e-23 | 53 |
leukocyte | 5.85e-20 | 136 |
lymphocyte of B lineage | 9.36e-20 | 24 |
pro-B cell | 9.36e-20 | 24 |
nongranular leukocyte | 3.76e-15 | 115 |
hematopoietic stem cell | 3.87e-13 | 168 |
hematopoietic lineage restricted progenitor cell | 5.39e-13 | 120 |
B cell | 1.94e-12 | 14 |
hematopoietic cell | 4.15e-12 | 177 |
hematopoietic oligopotent progenitor cell | 2.92e-11 | 161 |
hematopoietic multipotent progenitor cell | 2.92e-11 | 161 |
granulocyte | 1.04e-09 | 8 |
mature alpha-beta T cell | 4.44e-09 | 18 |
alpha-beta T cell | 4.44e-09 | 18 |
immature T cell | 4.44e-09 | 18 |
mature T cell | 4.44e-09 | 18 |
immature alpha-beta T cell | 4.44e-09 | 18 |
blood cell | 2.98e-08 | 11 |