FFCP PHASE1:Hg19::chr5:114631958..114631990,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=153733 | |EntrezGene=153733 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28599 | |HGNC=28599 | ||
|TSSclassifier=strong | |||
|UniProt=Q8NEF3 | |UniProt=Q8NEF3 | ||
|association_with_transcript=0bp_to_ENST00000395557,NM_152549,uc003kqy.2_5end | |association_with_transcript=0bp_to_ENST00000395557,NM_152549,uc003kqy.2_5end | ||
|cluster_id=chr5:114631958..114631990,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_6_at_CCDC112_5end | |description=CAGE_peak_6_at_CCDC112_5end | ||
|id=chr5:114631958..114631990,- | |id=chr5:114631958..114631990,- | ||
|ontology_enrichment_celltype=CL:0000540!1.86e-11!6;CL:0000031!1.86e-11!6;CL:0000404!1.86e-11!6;CL:0000047!1.03e-08!8;CL:0002574!3.53e-08!1 | |ontology_enrichment_celltype=CL:0000540!1.86e-11!6;CL:0000031!1.86e-11!6;CL:0000404!1.86e-11!6;CL:0000047!1.03e-08!8;CL:0002574!3.53e-08!1 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.08e-27;10!UBERON:0005564;2.08e-27;10 | |||
|ontology_enrichment_disease=DOID:5409!6.71e-08!4 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003135!4.94e-11!11;UBERON:0006947!1.05e-10!3;UBERON:0004054!1.05e-10!3;UBERON:0000473!4.75e-09!8;UBERON:0005418!7.01e-09!1;UBERON:0001389!7.01e-09!1;UBERON:0000026!7.01e-09!1;UBERON:0008784!7.01e-09!1;UBERON:0006058!7.01e-09!1;UBERON:0003663!7.01e-09!1;UBERON:0001383!7.01e-09!1;UBERON:0004256!7.01e-09!1;UBERON:0002529!7.01e-09!1;UBERON:0004708!7.01e-09!1;UBERON:0002101!7.01e-09!1;UBERON:0004709!7.01e-09!1;UBERON:0003661!7.01e-09!1;UBERON:0002471!7.01e-09!1;UBERON:0004357!7.01e-09!1;UBERON:0009872!7.01e-09!1;UBERON:0004347!7.01e-09!1;UBERON:0005420!7.01e-09!1;UBERON:0005732!7.01e-09!1;UBERON:0006057!7.01e-09!1;UBERON:0000978!7.01e-09!1;UBERON:0002103!7.01e-09!1;UBERON:0001665!7.01e-09!1;UBERON:0003823!7.01e-09!1;UBERON:0000154!7.01e-09!1;UBERON:0005733!7.01e-09!1;UBERON:0005730!7.01e-09!1;UBERON:0000998!8.15e-09!1;UBERON:0006868!8.15e-09!1;UBERON:0001301!1.71e-08!1;UBERON:0005904!3.06e-08!4 | |ontology_enrichment_uberon=UBERON:0003135!4.94e-11!11;UBERON:0006947!1.05e-10!3;UBERON:0004054!1.05e-10!3;UBERON:0000473!4.75e-09!8;UBERON:0005418!7.01e-09!1;UBERON:0001389!7.01e-09!1;UBERON:0000026!7.01e-09!1;UBERON:0008784!7.01e-09!1;UBERON:0006058!7.01e-09!1;UBERON:0003663!7.01e-09!1;UBERON:0001383!7.01e-09!1;UBERON:0004256!7.01e-09!1;UBERON:0002529!7.01e-09!1;UBERON:0004708!7.01e-09!1;UBERON:0002101!7.01e-09!1;UBERON:0004709!7.01e-09!1;UBERON:0003661!7.01e-09!1;UBERON:0002471!7.01e-09!1;UBERON:0004357!7.01e-09!1;UBERON:0009872!7.01e-09!1;UBERON:0004347!7.01e-09!1;UBERON:0005420!7.01e-09!1;UBERON:0005732!7.01e-09!1;UBERON:0006057!7.01e-09!1;UBERON:0000978!7.01e-09!1;UBERON:0002103!7.01e-09!1;UBERON:0001665!7.01e-09!1;UBERON:0003823!7.01e-09!1;UBERON:0000154!7.01e-09!1;UBERON:0005733!7.01e-09!1;UBERON:0005730!7.01e-09!1;UBERON:0000998!8.15e-09!1;UBERON:0006868!8.15e-09!1;UBERON:0001301!1.71e-08!1;UBERON:0005904!3.06e-08!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;6.50e-34;8!UBERON:0003135;4.86e-25;11!UBERON:0000991;1.02e-13;21!UBERON:0003101;3.77e-13;22!UBERON:0000079;3.77e-13;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.50e-34,8;UBERON:0003135,4.86e-25,11;UBERON:0000991,1.02e-13,21;UBERON:0009196,1.02e-13,21;UBERON:0009117,1.02e-13,21;UBERON:0005564,1.02e-13,21;UBERON:0004176,3.77e-13,22;UBERON:0003101,3.77e-13,22;UBERON:0000079,3.77e-13,22;UBERON:0002323,7.30e-07,46 | |||
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|short_description=p6@CCDC112 | |short_description=p6@CCDC112 | ||
}} | }} |
Latest revision as of 19:36, 19 September 2015
Short description: | p6@CCDC112 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CCDC112_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000395557, NM_152549, uc003kqy.2_5end |
EntrezGene: | CCDC112 |
HGNC: | 28599 |
UniProt: | Q8NEF3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 6.50e-34 | 8 |
male reproductive organ | 4.86e-25 | 11 |
gonad | 1.02e-13 | 21 |
indifferent external genitalia | 1.02e-13 | 21 |
indifferent gonad | 1.02e-13 | 21 |
gonad primordium | 1.02e-13 | 21 |
external genitalia | 3.77e-13 | 22 |
male organism | 3.77e-13 | 22 |
male reproductive system | 3.77e-13 | 22 |
body cavity | 7.30e-07 | 46 |