FFCP PHASE1:Hg19::chr19:54372779..54372792,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=91663 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7544 | |||
|TSSclassifier=strong | |||
|UniProt=Q96S97 | |||
|association_with_transcript=0bp_to_NM_001020818,uc002qcp.2_5end | |||
|cluster_id=chr19:54372779..54372792,+ | |||
|description=CAGE_peak_14_at_MYADM_5end | |||
|id=chr19:54372779..54372792,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.58e-13!180;CL:0000012!4.37e-10!682;CL:0000548!4.52e-10!679;CL:0000004!4.52e-10!679;CL:0000255!4.52e-10!679;CL:0000222!1.04e-08!119;CL:0000144!2.05e-08!625;CL:0000057!6.72e-08!75;CL:0000192!9.53e-07!42;CL:0000514!9.53e-07!42 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,5.14e-07,32;CL:0000222,7.18e-07,121;CL:0000057,7.74e-07,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!6.71e-12!118;UBERON:0004872!2.30e-08!84;UBERON:0001637!3.19e-08!42;UBERON:0003509!3.19e-08!42;UBERON:0004572!3.19e-08!42;UBERON:0001981!4.26e-08!60;UBERON:0007500!4.26e-08!60;UBERON:0004537!4.26e-08!60;UBERON:0006965!4.26e-08!60;UBERON:0005256!5.16e-08!143;UBERON:0002049!2.30e-07!79;UBERON:0007798!2.30e-07!79;UBERON:0004573!6.89e-07!33;UBERON:0004571!6.89e-07!33;UBERON:0002100!9.04e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;3.77e-07;42!UBERON:0003509;3.77e-07;42!UBERON:0004572;3.77e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,2.19e-12,117;UBERON:0004872,2.93e-09,83;UBERON:0007500,1.09e-08,59;UBERON:0001981,1.09e-08,59;UBERON:0004537,1.09e-08,59;UBERON:0006965,1.09e-08,59;UBERON:0001637,2.05e-08,42;UBERON:0003509,2.05e-08,42;UBERON:0004572,2.05e-08,42;UBERON:0000055,5.56e-07,68 | |||
|phase1_expression=0.908391896352783,1.07050261945492,1.26858963686374,2.00146596706261,1.34088328328186,0.872338524100369,0,0,0,2.45733936501509,11.8626198555313,0.873765488520689,0.263766978228454,0.74259811776028,0.331397375727916,0.672325146451775,1.20538905604795,2.92124036154949,0.975865597581014,2.58554221961255,2.65200898617529,2.5076377718247,0.286235987131057,1.50561867580173,2.38531015230125,0,0,0,0,1.15148819429164,1.39334510984468,0,0,0,0.232401601740905,0.142169232487422,1.17440175733939,0.553995408531877,1.40381113229099,0.434021741431704,0,0,0,0.581592955118259,1.88937971844405,0.485168122375632,1.16214518452842,1.23350366406548,0.309706370895104,0.575384784644301,0.512321413058201,0.47296445977717,1.03423704220986,1.93645405075148,0,0.941211697713023,0.818718450173537,0.224723484445085,0.306083892370903,0.320929027076094,0.639337125799041,0.659702600373432,0.598390972864896,0.852449501065388,2.61188314765726,2.26954089876456,1.24564449799115,1.25624332628372,0,0.217188844705117,0.605399502633369,0.736555271975129,0.316462387440884,0.211255286311942,0,0.209658645508376,0.22465726229299,0.150176892841506,0.48217676009124,0,0.19891667719909,0,0,0,0,0,0,0,0,0,1.1384259382189,0.587237189370939,0.382273228125229,0,1.12101712596307,0.526768169550154,0.196709770113833,0,0.205601498999509,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0,0.328875809207352,0,0,0,0,0,0.226618685395132,0,0,0,0,0,0,0,0.255973222308837,0,0,0,0.604820229674197,0.267440195783507,0.434473211648397,0,1.34140171940727,1.2786256184353,0.722878304769133,0,0.289693037921647,1.5905718941022,0.486634870302636,0.850813354476611,1.33037638477538,0.790513071238134,0.785874452986276,0,0.741568885568859,0,0,0,1.43094374583205,1.71598473234038,0.371457501329565,0.79504962946682,0.860234595106124,2.08284300964557,1.13061588384802,0.419499436209906,1.10047216776027,1.25396979922086,0,0.71153252537342,0.66944122552934,0,0,0.976248230192678,0.367663080345869,3.24056779152704,0.446498641420399,0,1.35133776579987,0,1.89853131913626,0.366403487860815,0,7.75560528296651,0,0.496971951695318,1.77282716330412,0.794455084879313,2.86836620748814,1.06400514659507,1.68203280042692,2.1349799145941,3.45334567784024,0.933633106199299,1.0776853765575,0.653847612453835,0.302714855289863,0.576175924479999,1.40592859100278,0,0,0.149448680551801,0.939475989150119,0.809364721840658,0.842704840213491,0,0.737005903870608,0.413303124703062,1.18800285728205,0.494533858557114,0,3.59309070908119,0.673344455816265,0.500474079487857,0,2.63386572528503,1.22595118319608,1.05166641234618,1.02088964844019,1.4351170855109,0.85422955527427,1.27159140695737,2.70081986475962,1.13357782162283,0.257640540045629,0.744467425326359,2.70042131586026,0.974370051611986,0.504867548488229,0.736399189138395,0.323292113637624,3.19508633264953,1.5112814734146,1.69560592310488,0,0.272746120590835,0.286804595389004,1.09776335516636,0.927708378250397,1.04574548582567,0.932949495138334,1.00928340350251,0.36497735907583,4.69348596989448,1.28648187638577,1.38134921352481,0.464367928031979,0,1.18306800039844,1.01150814046861,0.482022059766964,1.43382164552112,1.74303555273925,0.237270619111097,0.404493924480493,0.98110732562673,1.92373578473195,1.4763109092493,2.80483547606892,1.6462960453256,2.94017422771084,0,0,0,1.32438929824395,0.122988438543114,0.857839051492628,0,1.1240175325762,0.201057944823262,0,2.28065813717227,2.07986957055916,1.44331342025273,0.463721619900307,2.23076519048061,0.433099343283221,0,0.380508304469197,2.37061319387782,0.858486162094873,0,0.234004265139238,0,0,0.335964256397719,0,0,0,0.383382679165211,0.985326475791887,0.792435906119034,0.829312462163088,0.288239906833923,0.25248486685276,0.253991577168676,0.381988425558278,0,0,0.308482478109971,0.300343057843917,0,2.01835951821649,1.74384027533312,0.5867062865676,0.775630294546667,0,0.845302752556,1.06375246633948,2.08014873822732,0.257207374262142,0,0.799266537048298,1.42977993658148,1.08524321078289,0.823240336780769,0.65147236858747,0.710783897485092,1.58390374586686,0.904318131178758,1.74306691720059,1.19967589418468,0,0.502257091432126,0,1.4377491329495,0,0,0.868687840005475,0.410952645100767,0.358121926479791,0,0.197030760201927,0.215627574859517,0.256686072559497,0.508189248444927,0,0,0.502548796003046,0,2.99602809578873,0,1.24324654030811,0.736148950314839,0,0.271265023699736,3.32753378449291,1.24900292158013,0.946214490203608,1.17141414992713,0,0,1.03473071292505,3.98535359121262,1.10621501125022,0.434418072340414,0.195801157462741,1.02943027143257,0,0.431428401637234,0.640365346820666,0,0,3.32629322662648,1.24053903909388,1.84154367945675,1.12264037773229,1.02511319404561,1.02341449813341,1.93024705372329,1.48418066444991,1.69630663182921,0.532685175939381,0.739144404124282,1.55776328755086,0.464841513839837,0.362578348774867,1.60405176242628,0.0920809889358963,0.918515585316854,1.0925470080403,0.917870904715969,3.15839729035188,0.539107359730903,2.35304930753057,0,0.73886140225013,2.27466768141793,1.02056223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| |||
|short_description=p14@MYADM | |||
}} |
Latest revision as of 20:03, 19 September 2015
Short description: | p14@MYADM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_MYADM_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_001020818, uc002qcp.2_5end |
EntrezGene: | MYADM |
HGNC: | 7544 |
UniProt: | Q96S97 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 5.14e-07 | 32 |
mesodermal cell | 7.18e-07 | 121 |
fibroblast | 7.74e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
epithelial tube | 2.19e-12 | 117 |
splanchnic layer of lateral plate mesoderm | 2.93e-09 | 83 |
epithelial tube open at both ends | 1.09e-08 | 59 |
blood vessel | 1.09e-08 | 59 |
blood vasculature | 1.09e-08 | 59 |
vascular cord | 1.09e-08 | 59 |
artery | 2.05e-08 | 42 |
arterial blood vessel | 2.05e-08 | 42 |
arterial system | 2.05e-08 | 42 |
vessel | 5.56e-07 | 68 |