FFCP PHASE1:Hg19::chr1:202311054..202311071,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:202311054..202311071,-
|short_description=p1@UBE2T
|description=CAGE_peak_1_at_UBE2T_5end
|association_with_transcript=22bp_to_NM_014176,uc001gxx.3_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=29089 | |EntrezGene=29089 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25009 | |HGNC=25009 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NPD8 | |UniProt=Q9NPD8 | ||
|association_with_transcript=22bp_to_NM_014176,uc001gxx.3_5end | |||
|cluster_id=chr1:202311054..202311071,- | |||
|coexpression_cluster_id=C2551 | |||
|description=CAGE_peak_1_at_UBE2T_5end | |||
|id=chr1:202311054..202311071,- | |||
|ontology_enrichment_celltype=CL:0000066!8.60e-18!254;CL:0000548!2.22e-14!679;CL:0000004!2.22e-14!679;CL:0000255!2.22e-14!679;CL:0000012!5.23e-14!682;CL:0000333!4.34e-09!41;CL:0000133!1.78e-08!59;CL:0002319!2.87e-08!25;CL:0002321!3.11e-08!248;CL:0000003!4.52e-08!722;CL:0000220!8.44e-08!246;CL:0000055!9.21e-08!180;CL:0000221!1.79e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0002319;2.91e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.08e-18,253;CL:0000333,4.32e-09,41;CL:0000133,1.77e-08,59;CL:0002319,2.86e-08,25;CL:0002321,3.94e-08,250;CL:0000221,4.17e-07,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.03e-50!235;DOID:14566!6.58e-50!239;DOID:0050686!2.06e-25!137;DOID:0050687!4.14e-25!143;DOID:305!1.19e-20!106;DOID:2531!7.14e-18!51;DOID:0060083!7.14e-18!51;DOID:1240!8.55e-14!39;DOID:8692!6.62e-10!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;3.20e-11;39!DOID:2531;3.24e-11;51!DOID:0060083;3.24e-11;51!DOID:8692;1.47e-09;31!DOID:305;5.07e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:162,9.17e-51,235;DOID:14566,5.89e-50,239;DOID:0050686,1.89e-25,137;DOID:0050687,3.81e-25,143;DOID:305,1.10e-20,106;DOID:2531,7.07e-18,51;DOID:0060083,7.07e-18,51;DOID:1240,8.49e-14,39;DOID:8692,6.59e-10,31 | |||
|ontology_enrichment_uberon=UBERON:0001737!6.04e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;5.99e-07;9!UBERON:0001557;5.99e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,6.02e-07,9 | |||
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| ||
|short_description=p1@UBE2T | |||
}} | }} |
Latest revision as of 20:21, 19 September 2015
Short description: | p1@UBE2T |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_UBE2T_5end |
Coexpression cluster: | C2551_nonsmall_neuroblastoma_retinoblastoma_carcinoid_Reticulocytes_non_mesothelioma |
Association with transcript: | 22bp_to_NM_014176, uc001gxx.3_5end |
EntrezGene: | UBE2T |
HGNC: | 25009 |
UniProt: | Q9NPD8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.08e-18 | 253 |
migratory neural crest cell | 4.32e-09 | 41 |
neurectodermal cell | 1.77e-08 | 59 |
neural cell | 2.86e-08 | 25 |
embryonic cell | 3.94e-08 | 250 |
ectodermal cell | 4.17e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
larynx | 6.02e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
cancer | 9.17e-51 | 235 |
disease of cellular proliferation | 5.89e-50 | 239 |
organ system cancer | 1.89e-25 | 137 |
cell type cancer | 3.81e-25 | 143 |
carcinoma | 1.10e-20 | 106 |
hematologic cancer | 7.07e-18 | 51 |
immune system cancer | 7.07e-18 | 51 |
leukemia | 8.49e-14 | 39 |
myeloid leukemia | 6.59e-10 | 31 |