FFCP PHASE1:Hg19::chr1:202311079..202311086,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:202311079..202311086,- to FFCP PHASE1:Hg19::chr1:202311079..202311086,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=29089 | |EntrezGene=29089 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25009 | |HGNC=25009 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NPD8 | |UniProt=Q9NPD8 | ||
|association_with_transcript=7bp_to_NM_014176,uc001gxx.3_5end | |||
|cluster_id=chr1:202311079..202311086,- | |||
|coexpression_cluster_id=C2551 | |||
|description=CAGE_peak_3_at_UBE2T_5end | |||
|id=chr1:202311079..202311086,- | |||
|ontology_enrichment_celltype=CL:0000548!1.30e-14!679;CL:0000004!1.30e-14!679;CL:0000255!1.30e-14!679;CL:0000012!3.41e-14!682;CL:0000066!7.78e-13!254;CL:0000055!1.58e-10!180;CL:0000333!7.12e-10!41;CL:0000003!1.38e-08!722;CL:0000133!5.08e-08!59;CL:0002321!5.28e-08!248;CL:0000220!7.49e-08!246;CL:0000095!2.04e-07!17;CL:0000123!2.04e-07!17;CL:0002319!2.33e-07!25;CL:0000221!6.17e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000095;8.36e-08;17!CL:0002319;8.92e-08;25!CL:0000243;7.41e-07;15!CL:0000125;7.41e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,9.17e-12,253;CL:0000333,1.58e-10,41;CL:0000133,3.73e-08,59;CL:0002319,7.07e-08,25;CL:0000095,9.27e-08,17;CL:0000123,9.27e-08,17;CL:0000221,3.48e-07,72;CL:0002321,6.35e-07,250;CL:0000243,8.07e-07,15;CL:0000125,8.07e-07,15;CL:0000030,8.07e-07,15;CL:0000339,8.07e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000339;7.41e-07;15 | |||
|ontology_enrichment_disease=DOID:162!6.02e-40!235;DOID:14566!6.51e-40!239;DOID:0050686!8.05e-22!137;DOID:0050687!3.92e-18!143;DOID:2531!6.93e-17!51;DOID:0060083!6.93e-17!51;DOID:305!3.70e-14!106;DOID:1240!3.04e-13!39;DOID:8692!1.01e-09!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;2.59e-11;39!DOID:2531;5.04e-11;51!DOID:0060083;5.04e-11;51!DOID:8692;7.94e-10;31 | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.85e-39,235;DOID:14566,4.17e-39,239;DOID:0050686,1.99e-21,137;DOID:2531,8.87e-18,51;DOID:0060083,8.87e-18,51;DOID:0050687,9.80e-18,143;DOID:305,5.24e-14,106;DOID:1240,6.36e-14,39;DOID:8692,3.40e-10,31 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p3@UBE2T | |||
}} | }} |
Latest revision as of 20:22, 19 September 2015
Short description: | p3@UBE2T |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_UBE2T_5end |
Coexpression cluster: | C2551_nonsmall_neuroblastoma_retinoblastoma_carcinoid_Reticulocytes_non_mesothelioma |
Association with transcript: | 7bp_to_NM_014176, uc001gxx.3_5end |
EntrezGene: | UBE2T |
HGNC: | 25009 |
UniProt: | Q9NPD8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 9.17e-12 | 253 |
migratory neural crest cell | 1.58e-10 | 41 |
neurectodermal cell | 3.73e-08 | 59 |
neural cell | 7.07e-08 | 25 |
neuron associated cell | 9.27e-08 | 17 |
neuron associated cell (sensu Vertebrata) | 9.27e-08 | 17 |
ectodermal cell | 3.48e-07 | 72 |
embryonic cell | 6.35e-07 | 250 |
glial cell (sensu Vertebrata) | 8.07e-07 | 15 |
glial cell | 8.07e-07 | 15 |
glioblast | 8.07e-07 | 15 |
glioblast (sensu Vertebrata) | 8.07e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.85e-39 | 235 |
disease of cellular proliferation | 4.17e-39 | 239 |
organ system cancer | 1.99e-21 | 137 |
hematologic cancer | 8.87e-18 | 51 |
immune system cancer | 8.87e-18 | 51 |
cell type cancer | 9.80e-18 | 143 |
carcinoma | 5.24e-14 | 106 |
leukemia | 6.36e-14 | 39 |
myeloid leukemia | 3.40e-10 | 31 |