FFCP PHASE1:Hg19::chr12:6494394..6494419,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4055 | |EntrezGene=4055 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6718 | |HGNC=6718 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-205bp_to_ENST00000440421_5end | |association_with_transcript=-205bp_to_ENST00000440421_5end | ||
|cluster_id=chr12:6494394..6494419,+ | |||
|description=CAGE_peak_8_at_LTBR_5end | |description=CAGE_peak_8_at_LTBR_5end | ||
|id=chr12:6494394..6494419,+ | |id=chr12:6494394..6494419,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!8.92e-11!448;UBERON:0004120!8.92e-11!448;UBERON:0006603!8.92e-11!448;UBERON:0004119!3.34e-08!169;UBERON:0000925!3.34e-08!169;UBERON:0006595!3.34e-08!169;UBERON:0000468!3.19e-07!659;UBERON:0000467!4.34e-07!625;UBERON:0000480!6.10e-07!626 | |ontology_enrichment_uberon=UBERON:0000926!8.92e-11!448;UBERON:0004120!8.92e-11!448;UBERON:0006603!8.92e-11!448;UBERON:0004119!3.34e-08!169;UBERON:0000925!3.34e-08!169;UBERON:0006595!3.34e-08!169;UBERON:0000468!3.19e-07!659;UBERON:0000467!4.34e-07!625;UBERON:0000480!6.10e-07!626 | ||
|ontology_enrichment_uberon_v019=UBERON:0003937;2.92e-08;12!UBERON:0005399;2.92e-08;12!UBERON:0002367;3.43e-07;11!UBERON:0010147;3.43e-07;11 | |ontology_enrichment_uberon_v019=UBERON:0003937;2.92e-08;12!UBERON:0005399;2.92e-08;12!UBERON:0002367;3.43e-07;11!UBERON:0010147;3.43e-07;11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003937,2.62e-08,12;UBERON:0005399,2.62e-08,12;UBERON:0006554,4.54e-08,47;UBERON:0001008,8.44e-08,48;UBERON:0003064,1.24e-07,28;UBERON:0002367,4.21e-07,11;UBERON:0010147,4.21e-07,11;UBERON:0009846,4.21e-07,11;UBERON:0003353,4.21e-07,11;UBERON:0004902,4.21e-07,11;UBERON:0003820,4.21e-07,11;UBERON:0009847,4.21e-07,11 | |||
|phase1_expression=0.908391896352783,1.71280419112787,1.26858963686374,1.0007329835313,0.446961094427288,1.74467704820074,2.53299878168311,0,3.65659879479774,0.245733936501509,2.09340350391728,0,0.263766978228454,0.37129905888014,0.662794751455832,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.309632246632152,1.83884244895785,0,0.739508020333575,0,0,0,0,0.200544447470142,0.217010870715852,1.34349284543955,0.647787332037959,1.54545340580512,0.726991193897824,0.377875943688809,0.485168122375632,0.929716147622738,1.6446715520873,0.619412741790207,0.863077176966451,0.512321413058201,0,0.689491361473237,1.93645405075148,1.35426486594342,1.69418105588344,0.818718450173537,0.224723484445085,0.918251677112708,0.641858054152187,0.639337125799041,3.29851300186716,1.59570926097305,0,0.290209238628584,1.70215567407342,0,0.75374599577023,1.0429658368404,0,0.605399502633369,0,0,0,1.27562579979026,0.209658645508376,0.336985893439485,0.750884464207532,0.48217676009124,0.285012743741249,0.59675003159727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0.361439152384566,1.00267582127178,1.01392563272577,0.795285947051099,0.486634870302636,0,0.221729397462564,0,0.261958150995425,0,0.370784442784429,0,0.522389211897802,0.132957960518865,0,0,0,0,0,0.347140501607594,0.56530794192401,1.67799774483962,1.37559020970034,0.417989933073621,0.516833518338658,0.35576626268671,1.00416183829401,0.402829317109147,0,0.24406205754817,0.735326160691737,0,0.267899184852239,0,0.112611480483322,0,0,0.366403487860815,0,0,0.436094052142534,0,0.759783069987479,0,1.43418310374407,0.354668382198357,0,0,1.48000529050296,0,0.538842688278752,0.163461903113459,0,0,0.234321431833797,4.05808099879417,0,0.747243402759005,0.23486899728753,0.161872944368132,0,0,0.368502951935304,1.03325781175765,1.18800285728205,2.47266929278557,0.910161361938026,0,0,0.375355559615893,0,0,0.919463387397059,1.05166641234618,0.113432183160021,0,0.640672166455702,0.211931901159562,0.300091096084402,0.206105058476878,0.257640540045629,0.37223371266318,0,0.779496041289589,0.252433774244115,0.552299391853796,0.80823028409406,0.355009592516614,0.403008392910561,0.169560592310488,0.386521706326594,0,0.286804595389004,0,0,0,0,0.252320850875628,0,0,0,0,0.928735856063958,0,0.236613600079688,0.337169380156203,0.482022059766964,0.882351781859152,0.653638332277218,0,0.269662616320329,0.196221465125346,1.92373578473195,0.738155454624648,0,0.4115740113314,0,2.53510069643662,7.86261773342101,5.31710916013264,0,0.614942192715568,0,1.09750285408626,2.24803506515239,0.703702806881416,0.185176890317059,0.651616610620649,0,0,0.115930404975077,0,0.144366447761074,0.462985512576611,1.14152491340759,0,0,0,0.234004265139238,0.891786973732369,0,0.671928512795438,0.708875486211932,0,0.581267877027924,0,0,0,0,0.144119953416961,0.6312121671319,0.126995788584338,1.52795370223311,4.68869788840188,3.4214489204541,0.514137463516618,0.600686115687835,2.00078502841405,0.224262168690721,0,0.22001485746285,0.387815147273333,0,0.845302752556,1.06375246633948,1.04007436911366,0,0,0.266422179016099,0.428933980974443,1.08524321078289,0,0.65147236858747,0.355391948742546,0,0.904318131178758,0,0.199945982364114,0,1.50677127429638,0,0.239624855491583,0,0,0.289562613335158,0.821905290201534,0,0,0,0,0,0,0,0,0,0,0,2.99161459204025,0.414415513436035,0.49076596687656,0.500170521059677,0.271265023699736,0.415941723061614,0.178428988797162,0.473107245101804,0.234282829985426,0.902838299183157,0,4.1389228517002,0,0.184369168541703,1.47702144595741,2.15381273209015,1.02943027143257,0,0.431428401637234,0.213455115606889,1.5156378572313,0,0.907170879989041,0.992431231275107,0,1.68396056659844,1.15325234330131,1.02341449813341,0.965123526861645,0,0.616838775210622,0.710246901252508,0.574890092096664,2.07701771673448,0.348631135379878,2.65890789101569,2.20557117333613,3.95948252424354,0.459257792658427,0.546273504020151,2.09799063935079,0,0.0770153371044148,0,1.46139224653261,0.105551628892876,2.27466768141793,1.02056223165909,0.431831832204279,3.08454505380579,0.270946437543853,0,0,0.831076008928724,0.447749509444357,0,0,0,0.328014645699706,0.325378394664303,2.47298427954533,0.0915694648183434,0,1.14853107599234,1.30012049207304,0,1.16004861950546,0.462145851343933,0.307007349452259,0.137836572484531,0.107420244868274,0.580066775656914,0.340906509664404,0.178064071293475,2.14870389969272,1.15314040419064,0.127612712494584,0.910420027699949,1.39453664789186,0,0,0.616067160352178,1.06461206063404,0.869932992075073,0.9266210955196,0.429374660225974,0,0.316379424718726,0.762520775695299,0.767693373934002,0.855877976067841,0.318203247925937,1.56989728039846,0.179872457583315,0.54907405947211,0.235624804691373,0.404364963146632,0,0,0,1.46228093778771,0,1.22849920267187,2.40389234321312,0,1.10273068709225,1.99031692572366,1.31535265576129,0,0.655894752046633,0.405820753925408,0.30982349809975,0.281695602532241,0,0.196498082026242,0,0,0.633322905892992,1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| ||
|short_description=p8@LTBR | |short_description=p8@LTBR | ||
}} | }} |
Latest revision as of 21:05, 19 September 2015
Short description: | p8@LTBR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_LTBR_5end |
Coexpression cluster: | NA |
Association with transcript: | -205bp_to_ENST00000440421_5end |
EntrezGene: | LTBR |
HGNC: | 6718 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sex gland | 2.62e-08 | 12 |
male reproductive gland | 2.62e-08 | 12 |
urinary system structure | 4.54e-08 | 47 |
renal system | 8.44e-08 | 48 |
intermediate mesoderm | 1.24e-07 | 28 |
prostate gland | 4.21e-07 | 11 |
male accessory sex gland | 4.21e-07 | 11 |
embryonic cloacal epithelium | 4.21e-07 | 11 |
epithelium of hindgut | 4.21e-07 | 11 |
urogenital sinus epithelium | 4.21e-07 | 11 |
prostate bud | 4.21e-07 | 11 |
prostate field | 4.21e-07 | 11 |