FFCP PHASE1:Hg19::chr5:118668955..118668964,+: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr5:118668955..118668964,+ to FFCP PHASE1:Hg19::chr5:118668955..118668964,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=25816 | |EntrezGene=25816 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17260 | |HGNC=17260 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z713 | |UniProt=B7Z713 | ||
|association_with_transcript=85bp_to_ENST00000513374,uc011cwf.1_5end | |||
|cluster_id=chr5:118668955..118668964,+ | |||
|description=CAGE_peak_19_at_TNFAIP8_5end | |||
|id=chr5:118668955..118668964,+ | |||
|ontology_enrichment_celltype=CL:0000838!1.50e-29!52;CL:0000542!8.09e-29!53;CL:0000051!8.09e-29!53;CL:0000945!6.34e-26!24;CL:0000826!6.34e-26!24;CL:0000236!3.07e-12!14;CL:0000791!7.11e-10!18;CL:0000789!7.11e-10!18;CL:0002420!7.11e-10!18;CL:0002419!7.11e-10!18;CL:0000790!7.11e-10!18;CL:0000084!1.88e-09!25;CL:0000827!1.88e-09!25;CL:0002087!8.22e-09!119;CL:0000738!2.52e-08!140;CL:0002031!1.89e-07!124;CL:0002621!5.42e-07!3;CL:0000898!6.14e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000236;3.18e-35;13!CL:0000945;7.53e-31;24!CL:0000542;1.53e-15;53!CL:0000895;8.20e-11;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,9.51e-33,14;CL:0000945,7.58e-31,24;CL:0000826,7.58e-31,24;CL:0000838,2.37e-20,52;CL:0000542,6.17e-20,53;CL:0000051,6.17e-20,53;CL:0000810,1.21e-10,1;CL:0000895,1.21e-10,1;CL:0002436,1.21e-10,1;CL:0002427,1.21e-10,1;CL:0002428,1.21e-10,1;CL:0002429,1.21e-10,1;CL:0002433,1.21e-10,1;CL:0002431,1.21e-10,1;CL:0002432,1.21e-10,1;CL:0002087,3.37e-08,115;CL:0002031,8.64e-08,120 | |||
|ontology_enrichment_development_v019=CL:0000051;1.53e-15;53!CL:0002427;8.20e-11;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:630;8.20e-11;1!DOID:0050177;8.20e-11;1!DOID:0050427;8.20e-11;1!DOID:2355;8.20e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,6.14e-11,1;DOID:0050177,6.14e-11,1;DOID:0050427,6.14e-11,1;DOID:2355,1.61e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0000974!6.93e-16!10;UBERON:0002370!1.96e-08!4;UBERON:0005058!1.96e-08!4;UBERON:0009113!1.96e-08!4;UBERON:0003295!1.96e-08!4;UBERON:0005562!1.96e-08!4;UBERON:0003729!8.07e-08!5;UBERON:0004177!4.20e-07!7;UBERON:0001949!5.42e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0003343;2.05e-10;4!UBERON:0004785;2.05e-10;4!UBERON:0000974;3.15e-07;6!UBERON:0003729;4.23e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,1.27e-10,4;UBERON:0004785,1.27e-10,4;UBERON:0000974,3.71e-09,10;UBERON:0003729,4.06e-07,13 | |||
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| ||
|short_description=p19@TNFAIP8 | |||
}} | }} |
Latest revision as of 21:38, 19 September 2015
Short description: | p19@TNFAIP8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_TNFAIP8_5end |
Coexpression cluster: | NA |
Association with transcript: | 85bp_to_ENST00000513374, uc011cwf.1_5end |
EntrezGene: | TNFAIP8 |
HGNC: | 17260 |
UniProt: | B7Z713 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 9.51e-33 | 14 |
lymphocyte of B lineage | 7.58e-31 | 24 |
pro-B cell | 7.58e-31 | 24 |
lymphoid lineage restricted progenitor cell | 2.37e-20 | 52 |
lymphocyte | 6.17e-20 | 53 |
common lymphoid progenitor | 6.17e-20 | 53 |
CD4-positive, alpha-beta thymocyte | 1.21e-10 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 1.21e-10 | 1 |
mature CD4 single-positive thymocyte | 1.21e-10 | 1 |
resting double-positive thymocyte | 1.21e-10 | 1 |
double-positive blast | 1.21e-10 | 1 |
CD69-positive double-positive thymocyte | 1.21e-10 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 1.21e-10 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 1.21e-10 | 1 |
CD24-positive, CD4 single-positive thymocyte | 1.21e-10 | 1 |
nongranular leukocyte | 3.37e-08 | 115 |
hematopoietic lineage restricted progenitor cell | 8.64e-08 | 120 |
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 1.27e-10 | 4 |
respiratory system mucosa | 1.27e-10 | 4 |
neck | 3.71e-09 | 10 |
mouth mucosa | 4.06e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 6.14e-11 | 1 |
monogenic disease | 6.14e-11 | 1 |
xeroderma pigmentosum | 6.14e-11 | 1 |
anemia | 1.61e-10 | 1 |