FFCP PHASE1:Hg19::chr22:32651326..32651340,-: Difference between revisions
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|id=chr22:32651326..32651340,-
|short_description=p1@SLC5A4
|description=CAGE_peak_1_at_SLC5A4_5end
|association_with_transcript=0bp_to_ENST00000266086_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6527 | |EntrezGene=6527 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11039 | |HGNC=11039 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NY91 | |UniProt=Q9NY91 | ||
|association_with_transcript=0bp_to_ENST00000266086_5end | |||
|cluster_id=chr22:32651326..32651340,- | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_1_at_SLC5A4_5end | |||
|id=chr22:32651326..32651340,- | |||
|ontology_enrichment_celltype=CL:0002535!2.05e-15!2 | |||
|ontology_enrichment_celltype_v019=CL:0002535;1.17e-17;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,1.07e-17,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3493!2.74e-15!2;DOID:4362!6.04e-07!5 | |||
|ontology_enrichment_disease_v019=DOID:4362;7.25e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,7.01e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0002108!9.83e-18!14;UBERON:0000160!9.84e-17!27;UBERON:0006955!2.05e-15!2;UBERON:0004801!2.05e-15!2;UBERON:0005409!3.87e-13!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0002108;1.22e-59;4!UBERON:0000160;7.62e-30;17!UBERON:0005409;1.59e-23;22!UBERON:0006955;1.17e-17;2!UBERON:0004801;1.17e-17;2!UBERON:0004921;1.07e-13;33!UBERON:0002114;2.31e-12;2!UBERON:0001555;1.03e-07;54!UBERON:0000002;9.23e-07;6!UBERON:0001560;9.23e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,1.35e-59,4;UBERON:0000160,7.91e-30,17;UBERON:0005409,6.97e-21,25;UBERON:0006955,1.07e-17,2;UBERON:0004801,1.07e-17,2;UBERON:0002114,2.31e-12,2;UBERON:0000002,8.97e-07,6;UBERON:0001560,8.97e-07,6 | |||
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|short_description=p1@SLC5A4 | |||
}} | }} |
Latest revision as of 21:54, 19 September 2015
Short description: | p1@SLC5A4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC5A4_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 0bp_to_ENST00000266086_5end |
EntrezGene: | SLC5A4 |
HGNC: | 11039 |
UniProt: | Q9NY91 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 1.07e-17 | 2 |
Ontology term | p-value | n |
---|---|---|
small intestine | 1.35e-59 | 4 |
intestine | 7.91e-30 | 17 |
gastrointestinal system | 6.97e-21 | 25 |
uterine epithelium | 1.07e-17 | 2 |
cervix epithelium | 1.07e-17 | 2 |
duodenum | 2.31e-12 | 2 |
uterine cervix | 8.97e-07 | 6 |
neck of organ | 8.97e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 7.01e-08 | 5 |