FFCP PHASE1:Hg19::chr6:80228516..80228529,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=167691 | |EntrezGene=167691 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=31923 | |HGNC=31923 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=272bp_to_uc011dyq.1_5end | |association_with_transcript=272bp_to_uc011dyq.1_5end | ||
|cluster_id=chr6:80228516..80228529,- | |||
|coexpression_cluster_id=C112 | |||
|description=CAGE_peak_8_at_LCA5_5end | |description=CAGE_peak_8_at_LCA5_5end | ||
|id=chr6:80228516..80228529,- | |id=chr6:80228516..80228529,- | ||
|ontology_enrichment_celltype=CL:0002568!3.96e-10!1 | |ontology_enrichment_celltype=CL:0002568!3.96e-10!1 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8692!7.15e-14!31;DOID:1240!7.08e-11!39;DOID:8552!9.84e-11!1;DOID:1036!1.01e-10!8;DOID:2531!3.86e-08!51;DOID:0060083!3.86e-08!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;4.34e-14;31!DOID:1240;2.05e-09;39!DOID:2531;3.13e-08;51!DOID:0060083;3.13e-08;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,3.16e-15,31;DOID:1240,2.67e-12,39;DOID:2531,1.28e-09,51;DOID:0060083,1.28e-09,51 | |||
|ontology_enrichment_uberon=UBERON:0000998!1.73e-10!1;UBERON:0006868!1.73e-10!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000945;2.66e-11;5!UBERON:0010039;2.66e-11;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000945,1.49e-07,8;UBERON:0010039,1.49e-07,8 | |||
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|short_description=p8@LCA5 | |short_description=p8@LCA5 | ||
}} | }} |
Latest revision as of 22:26, 19 September 2015
Short description: | p8@LCA5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_LCA5_5end |
Coexpression cluster: | C112_gastric_pancreas_temporal_duodenum_small_extraskeletal_adrenal |
Association with transcript: | 272bp_to_uc011dyq.1_5end |
EntrezGene: | LCA5 |
HGNC: | 31923 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stomach | 1.49e-07 | 8 |
food storage organ | 1.49e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 3.16e-15 | 31 |
leukemia | 2.67e-12 | 39 |
hematologic cancer | 1.28e-09 | 51 |
immune system cancer | 1.28e-09 | 51 |