FFCP PHASE1:Hg19::chr17:37844436..37844455,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2064 | |EntrezGene=2064 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3430 | |HGNC=3430 | ||
|TSSclassifier=strong | |||
|UniProt=P04626,Q9UK79 | |UniProt=P04626,Q9UK79 | ||
|association_with_transcript=43bp_to_ENST00000406381,NM_001005862,uc002hsl.2,uc002hsm.2,uc010cwa.2_5end | |association_with_transcript=43bp_to_ENST00000406381,NM_001005862,uc002hsl.2,uc002hsm.2,uc010cwa.2_5end | ||
|cluster_id=chr17:37844436..37844455,+ | |||
|description=CAGE_peak_5_at_ERBB2_5end | |description=CAGE_peak_5_at_ERBB2_5end | ||
|id=chr17:37844436..37844455,+ | |id=chr17:37844436..37844455,+ | ||
|ontology_enrichment_celltype=CL:0000221!5.76e-11!71;CL:0000133!1.71e-09!59;CL:0000333!3.14e-09!41;CL:0002319!1.70e-08!25;CL:0000095!1.02e-07!17;CL:0000123!1.02e-07!17;CL:0000243!7.20e-07!15;CL:0000125!7.20e-07!15;CL:0000030!7.20e-07!15;CL:0000339!7.20e-07!15 | |ontology_enrichment_celltype=CL:0000221!5.76e-11!71;CL:0000133!1.71e-09!59;CL:0000333!3.14e-09!41;CL:0002319!1.70e-08!25;CL:0000095!1.02e-07!17;CL:0000123!1.02e-07!17;CL:0000243!7.20e-07!15;CL:0000125!7.20e-07!15;CL:0000030!7.20e-07!15;CL:0000339!7.20e-07!15 | ||
|ontology_enrichment_celltype_v019=CL:0002322;1.56e-17;5!CL:0002321;2.45e-13;15!CL:0002319;3.99e-08;25!CL:0000128;2.16e-07;7!CL:0000126;2.16e-07;7!CL:0000127;2.16e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,6.63e-18,5;CL:0000221,1.62e-12,72;CL:0000333,1.26e-11,41;CL:0000133,2.01e-11,59;CL:0002319,3.79e-08,25;CL:0000128,2.00e-07,7;CL:0000126,2.00e-07,7;CL:0000127,2.00e-07,7;CL:0002453,2.00e-07,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!5.95e-12!143;DOID:162!2.64e-11!235;DOID:14566!3.86e-11!239;DOID:305!1.21e-08!106 | |ontology_enrichment_disease=DOID:0050687!5.95e-12!143;DOID:162!2.64e-11!235;DOID:14566!3.86e-11!239;DOID:305!1.21e-08!106 | ||
|ontology_enrichment_disease_v019=DOID:3095;4.92e-08;22!DOID:2994;4.92e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,6.88e-08,22;DOID:2994,6.88e-08,22 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0.491467873003018,1.39560233594486,0.873765488520689,0.527533956456907,0.247532705920093,0,0,0.602694528023977,0,0,0.861847406537515,1.22400414746552,1.25381888591235,1.14494394852423,0.958120975510189,0.376627918784408,0.458480434487708,0.164201178899891,0.236132343941038,0,0,0,0,1.204823675113,0.369754010166788,0.92960640696362,0.284338464974843,0,0,0,0,0,0,0,0.145398238779565,0.377875943688809,0,0,0,0,0.28769239232215,0,0.236482229888585,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0.393419540227666,0.393010762749165,0,0,0,0,0,0.334231370655521,0,0.221533894583621,0.541607727530031,0,0,0.164437904603676,0,0,0.296573126324121,0,0,0.566546713487831,0.383220493601921,0,0,0,0,0,0.150575119077773,0,0,0.236777252044017,0,0,0.267440195783507,0.144824403882799,0,0.670700859703636,0,0.722878304769133,0,0,0,0.973269740605272,0.850813354476611,0.221729397462564,0.702678285545008,0.785874452986276,1.09288586487763,0.741568885568859,0,0,0,0,0,0,0.39752481473341,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0.446498641420399,0.22452937262617,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0,0.132409180813219,0.286836620748814,0.354668382198357,0,0,0,0,0.134710672069688,0.326923806226917,0.605429710579726,0,0.937285727335186,0,0,0,0.939475989150119,0.485618833104395,0.702254033511242,0.61246251376468,0.122834317311768,0.206651562351531,0,0,0,0,0.336672227908132,0.125118519871964,0,0,0.30648779579902,0,0.226864366320042,0.358779271377724,0,0.211931901159562,0.600182192168805,0.103052529238439,0,0.37223371266318,0,0.487185025805993,1.00973509697646,0.0920498986422993,0.323292113637624,0.710019185033229,0.201504196455281,0.508681776931463,0,0,0,2.80539524098069,3.71083351300159,2.5562667431294,1.86589899027667,3.5324919122588,3.6497735907583,0,0.643240938192885,0,0,0,0.236613600079688,0.337169380156203,0,0,0,0.474541238222193,0.269662616320329,0,0,0,0,0,0,2.53510069643662,0,0.590789906681404,0.441463099414651,0.122988438543114,0,0.109750285408626,1.1240175325762,0.301586917234893,1.29623823221941,0.325808305310325,2.07986957055916,0,0.579652024875384,0.117408694235822,0,0,0,0,0.858486162094873,0,0.234004265139238,0.445893486866185,0,0.16798212819886,0.283550194484773,0.716468181622786,0.581267877027924,0,2.46331618947972,0.088048434013226,0.207328115540772,0.288239906833923,0.12624243342638,0.380987365753014,0,1.17217447210047,0,0.102827492703324,0.600686115687835,0,1.23344192779897,0,0.22001485746285,0,0,0,0,0,0.514414748524284,1.41849132023278,0.532844358032199,0.285955987316295,0,0.823240336780769,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0.144781306667579,0.410952645100767,0,0.448340575974109,0,0.215627574859517,0.128343036279748,0.254094624222463,0,0,0.335032530668698,0.637938751653163,0,0,0,0.24538298343828,0.500170521059677,0,0.415941723061614,0.178428988797162,0.157702415033935,0.117141414992713,0.300946099727719,0,0,0,0,0.173767228936166,0.587403472388222,0,0,0,0,0.909382714338778,1.66435439510497,1.20956117331872,0,0.153461973288062,0,0.128139149255701,0.511707249066704,0.160853921143607,1.48418066444991,0.154209693802656,0.177561725313127,0.0821271560138091,0,0.232420756919918,0,0.200506470303285,0.184161977871793,0.229628896329213,0.364182336013434,0,0.451199612907412,0,0.784349769176855,0,0.211103257785751,0,0,0.215915916102139,0,0.541892875087706,0.501689773854853,0,0,0,0.438519753291869,0.261435451024901,0,0.328014645699706,0,0.103041011647722,0.54941678891006,0.907604499126468,0.574265537996172,0.650060246036521,0,0,0.308097234229289,0.614014698904518,0.275673144969061,0.537101224341368,0.145016693914229,0.340906509664404,0.445160178233687,0.165284915360978,0.384380134730212,0.638063562472921,0.30347334256665,0,0.31481234683064,0,0,0,0,0.18532421910392,0.286249773483982,0.372158369359667,0,0,0,0,0,0,0.539617372749944,0.274537029736055,0.235624804691373,0.404364963146632,0,0,0,0.243713489631284,0,0.272999822815972,0,1.13008116620243,0,0,0,0.578775534266688,0,0,0.30982349809975,0.281695602532241,0.143411352204052,0.294747123039363,0,0.354761064070598,0,0.329294892959902,0.379473173765715,1.04980416073495,0.577332676353072,0,0,0.0941438007767792,0.86101074534246,0,1.7737206141467,0.229723400206959,0,0,0,0,0,0,0,0.79312517629427,0.320472213382419,0,0.490080431962063,0.557409525377156,0,0.213425530045242,0.318852545457645,0.199579371432817,0,0.423347165447766,0.324621940274555,0,0.228234679033192,0,0,0.338583555603207,0,0.403599414382095,0,0.343505344755765,0.614481528616916,0.894704431569664,0,0,0.556812347790485,0,0,0,0,0.561421621224659,0,0.485442086998054,0.557216921387392,0.284136146806413,0,0,0,0.994147647766298,0.422008249231538,0.111308705022906,0.824019371133798,0.63337622438398,0,0.552567831062295,0.251932747854276,1.94310496754094,0.123084805461069,0,0.449341755736634,0.179021174675609,0,0,0,0,0,0.185536196323703,0,0,1.74919999992391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| ||
|short_description=p5@ERBB2 | |short_description=p5@ERBB2 | ||
}} | }} |
Latest revision as of 22:32, 19 September 2015
Short description: | p5@ERBB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ERBB2_5end |
Coexpression cluster: | NA |
Association with transcript: | 43bp_to_ENST00000406381, NM_001005862, uc002hsl.2, uc002hsm.2, uc010cwa.2_5end |
EntrezGene: | ERBB2 |
HGNC: | 3430 |
UniProt: | P04626Q9UK79 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 6.63e-18 | 5 |
ectodermal cell | 1.62e-12 | 72 |
migratory neural crest cell | 1.26e-11 | 41 |
neurectodermal cell | 2.01e-11 | 59 |
neural cell | 3.79e-08 | 25 |
oligodendrocyte | 2.00e-07 | 7 |
macroglial cell | 2.00e-07 | 7 |
astrocyte | 2.00e-07 | 7 |
oligodendrocyte precursor cell | 2.00e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 6.88e-08 | 22 |
germ cell cancer | 6.88e-08 | 22 |