FFCP PHASE1:Hg19::chr14:37051768..37051779,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr14:37051768..37051779,-
|short_description=p4@NKX2-8
|description=CAGE_peak_4_at_NKX2-8_5end
|association_with_transcript=6bp_to_NM_014360,uc001wtx.2_5end
|...") |
No edit summary |
||
(13 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26257 | |EntrezGene=26257 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16364 | |HGNC=16364 | ||
|TSSclassifier=strong | |||
|UniProt=O15522 | |UniProt=O15522 | ||
|association_with_transcript=6bp_to_NM_014360,uc001wtx.2_5end | |||
|cluster_id=chr14:37051768..37051779,- | |||
|coexpression_cluster_id=C15 | |||
|description=CAGE_peak_4_at_NKX2-8_5end | |||
|id=chr14:37051768..37051779,- | |||
|ontology_enrichment_celltype=CL:0000066!7.95e-07!254;CL:0002076!8.58e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0000077;5.83e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,6.15e-08,19 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.71e-14;10!UBERON:0005564;3.71e-14;10 | |||
|ontology_enrichment_disease=DOID:1749!2.15e-10!14;DOID:305!4.86e-10!106;DOID:0050687!1.43e-07!143;DOID:162!3.01e-07!235;DOID:14566!6.09e-07!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002046!2.05e-10!5;UBERON:0004117!2.05e-10!5;UBERON:0007689!2.05e-10!5;UBERON:0007123!2.05e-10!5;UBERON:0003091!2.05e-10!5;UBERON:0002298!1.59e-09!8;UBERON:0000065!1.85e-08!53;UBERON:0003343!1.53e-07!4;UBERON:0004785!1.53e-07!4;UBERON:0001004!1.98e-07!72;UBERON:0003076!3.53e-07!15;UBERON:0003057!3.53e-07!15;UBERON:0008814!5.93e-07!15;UBERON:0004119!7.78e-07!169;UBERON:0000925!7.78e-07!169;UBERON:0006595!7.78e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;5.97e-34;1!UBERON:0006518;5.97e-34;1!UBERON:0008949;5.97e-34;1!UBERON:0000101;5.97e-34;1!UBERON:0002167;5.97e-34;1!UBERON:0000473;2.01e-17;8!UBERON:0003135;5.76e-13;11!UBERON:0000991;2.95e-07;21!UBERON:0003101;5.74e-07;22!UBERON:0000079;5.74e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,3.61e-34,1;UBERON:0006518,3.61e-34,1;UBERON:0008949,3.61e-34,1;UBERON:0000101,3.61e-34,1;UBERON:0002167,3.61e-34,1;UBERON:0000473,2.01e-17,8;UBERON:0003135,5.76e-13,11;UBERON:0000991,2.95e-07,21;UBERON:0009196,2.95e-07,21;UBERON:0009117,2.95e-07,21;UBERON:0005564,2.95e-07,21;UBERON:0004176,5.74e-07,22;UBERON:0003101,5.74e-07,22;UBERON:0000079,5.74e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0.110293972732394,0,0,0.269662616320329,0,0,0,0,0,0,0,0,0,0,0.491953754172454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0.768760269460425,0,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.3565277527036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.697118721393016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0.468528891450678,0,0,0,0,0,0,0,0,0,0,0.330991955875499,0,0,0.284609546029793,0,0.867798691675654,0.587954384486266,0,0,0,0,0,0,0.387956065953678,0,0,0,0,0.0633107959558787,0,0,0,0,0,0.229073192331831,0,0,0.248505071130865,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0.314408610199332,1.65695622138878,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0.248385611765534,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30497145982606,0,0,3.91578727210348,0.179088841081487,0.308801447160972,0,0.176689145945881,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235939446695481,0.183428598521679,0.115525666150338,0,0,0,0,0,0,0,0.327543835020193,0,0,0,0,0.126831620387814,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0.135939465953663,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.467878926924211,0,0,0,0,0.150962843566674,0,0,0.940634592723046,0,0,0.785233868459781,0,0.4226557275834,0,0,0,0,0.178553938605658,0,0,0,0,0.143339583151451,0,0.0679914901909147,0,0,0,0,0,0,0,0.380095503034311,0,0,0.0918948995348449,0,1.36401656792831,1.60778478093707,0,0.20686599172379,0,0,0,0,0.224263725161227,0.12729431655633,0.202117188958219,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0.110293972732394,0,0,0.269662616320329,0,0,0,0,0,0,0,0,0,0,0.491953754172454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0.768760269460425,0,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.3565277527036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.697118721393016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0.468528891450678,0,0,0,0,0,0,0,0,0,0,0.330991955875499,0,0,0.284609546029793,0,0.867798691675654,0.587954384486266,0,0,0,0,0,0,0.387956065953678,0,0,0,0,0.0633107959558787,0,0,0,0,0,0.229073192331831,0,0,0.248505071130865,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0.314408610199332,1.65695622138878,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0.248385611765534,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30497145982606,0,0,3.91578727210348,0.179088841081487,0.308801447160972,0,0.176689145945881,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235939446695481,0.183428598521679,0.115525666150338,0,0,0,0,0,0,0,0.327543835020193,0,0,0,0,0.126831620387814,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0.135939465953663,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.467878926924211,0,0,0,0,0.150962843566674,0,0,0.940634592723046,0,0,0.785233868459781,0,0.4226557275834,0,0,0,0,0.178553938605658,0,0,0,0,0.143339583151451,0,0.0679914901909147,0,0,0,0,0,0,0,0.380095503034311,0,0,0.0918948995348449,0,1.36401656792831,1.60778478093707,0,0.20686599172379,0,0,0,0,0.224263725161227,0.12729431655633,0.202117188958219,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p4@NKX2-8 | |||
}} | }} |
Latest revision as of 22:46, 19 September 2015
Short description: | p4@NKX2-8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_NKX2-8_5end |
Coexpression cluster: | C15_anaplastic_small_skeletal_neuroblastoma_parietal_temporal_tongue |
Association with transcript: | 6bp_to_NM_014360, uc001wtx.2_5end |
EntrezGene: | NKX2-8 |
HGNC: | 16364 |
UniProt: | O15522 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 6.15e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 3.61e-34 | 1 |
right lung lobe | 3.61e-34 | 1 |
lower lobe of lung | 3.61e-34 | 1 |
lobe of lung | 3.61e-34 | 1 |
right lung | 3.61e-34 | 1 |
testis | 2.01e-17 | 8 |
male reproductive organ | 5.76e-13 | 11 |
gonad | 2.95e-07 | 21 |
indifferent external genitalia | 2.95e-07 | 21 |
indifferent gonad | 2.95e-07 | 21 |
gonad primordium | 2.95e-07 | 21 |
external genitalia | 5.74e-07 | 22 |
male organism | 5.74e-07 | 22 |
male reproductive system | 5.74e-07 | 22 |