FFCP PHASE1:Hg19::chr18:5540365..5540373,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23136 | |EntrezGene=23136 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3380 | |HGNC=3380 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y2J2,F5GX05 | |UniProt=Q9Y2J2,F5GX05 | ||
|association_with_transcript=181bp_to_ENST00000342933,ENST00000400111,ENST00000544123,uc010wzh.1_5end | |association_with_transcript=181bp_to_ENST00000342933,ENST00000400111,ENST00000544123,uc010wzh.1_5end | ||
|cluster_id=chr18:5540365..5540373,- | |||
|coexpression_cluster_id=C137 | |coexpression_cluster_id=C137 | ||
|description=CAGE_peak_22_at_EPB41L3_5end | |description=CAGE_peak_22_at_EPB41L3_5end | ||
|id=chr18:5540365..5540373,- | |id=chr18:5540365..5540373,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007123;1.71e-14;5!UBERON:0009117;6.34e-08;10!UBERON:0005564;6.34e-08;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3112;3.34e-66;1!DOID:4556;2.62e-23;3!DOID:3908;1.40e-14;5!DOID:3905;1.04e-08;9 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,2.39e-66,1;DOID:4556,2.62e-23,3;DOID:3908,1.40e-14,5;DOID:3905,1.04e-08,9 | |||
|ontology_enrichment_uberon=UBERON:0000988!9.68e-12!3;UBERON:0007023!2.25e-10!115;UBERON:0002148!1.13e-08!2;UBERON:0009662!1.13e-08!2;UBERON:0002298!1.73e-07!8 | |ontology_enrichment_uberon=UBERON:0000988!9.68e-12!3;UBERON:0007023!2.25e-10!115;UBERON:0002148!1.13e-08!2;UBERON:0009662!1.13e-08!2;UBERON:0002298!1.73e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0002046;1.71e-14;5!UBERON:0000473;1.41e-09;8!UBERON:0003135;2.55e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002046,1.60e-14,5;UBERON:0004117,1.60e-14,5;UBERON:0007689,1.60e-14,5;UBERON:0007123,1.60e-14,5;UBERON:0003091,1.60e-14,5;UBERON:0000473,1.47e-09,8;UBERON:0009722,2.47e-07,11;UBERON:0007690,2.47e-07,11;UBERON:0003135,2.63e-07,11 | |||
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| ||
|short_description=p22@EPB41L3 | |short_description=p22@EPB41L3 | ||
}} | }} |
Latest revision as of 22:47, 19 September 2015
Short description: | p22@EPB41L3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_22_at_EPB41L3_5end |
Coexpression cluster: | C137_large_ductal_melanoma_cervical_Endothelial_Smooth_chronic |
Association with transcript: | 181bp_to_ENST00000342933, ENST00000400111, ENST00000544123, uc010wzh.1_5end |
EntrezGene: | EPB41L3 |
HGNC: | 3380 |
UniProt: | Q9Y2J2F5GX05 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thyroid gland | 1.60e-14 | 5 |
pharyngeal pouch | 1.60e-14 | 5 |
thyroid diverticulum | 1.60e-14 | 5 |
pharyngeal pouch 2 | 1.60e-14 | 5 |
thyroid primordium | 1.60e-14 | 5 |
testis | 1.47e-09 | 8 |
entire pharyngeal arch endoderm | 2.47e-07 | 11 |
early pharyngeal endoderm | 2.47e-07 | 11 |
male reproductive organ | 2.63e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 2.39e-66 | 1 |
lung large cell carcinoma | 2.62e-23 | 3 |
non-small cell lung carcinoma | 1.40e-14 | 5 |
lung carcinoma | 1.04e-08 | 9 |