FFCP PHASE1:Hg19::chr6:80714332..80714411,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:80714332..80714411,+ to FFCP PHASE1:Hg19::chr6:80714332..80714411,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7272 | |EntrezGene=7272 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12401 | |HGNC=12401 | ||
|TSSclassifier=strong | |||
|UniProt=D6RFY1 | |UniProt=D6RFY1 | ||
|association_with_transcript=0bp_to_ENST00000509313,uc003pjb.3,uc003pjc.2_5end | |||
|cluster_id=chr6:80714332..80714411,+ | |||
|coexpression_cluster_id=C109 | |||
|description=CAGE_peak_1_at_TTK_5end | |||
|id=chr6:80714332..80714411,+ | |||
|ontology_enrichment_celltype=CL:0000548!7.78e-13!679;CL:0000004!7.78e-13!679;CL:0000255!7.78e-13!679;CL:0000012!1.07e-12!682;CL:0000066!3.34e-10!254;CL:0002319!4.79e-08!25 | |||
|ontology_enrichment_celltype_v019=CL:0002319;8.78e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.10e-09,253;CL:0002319,8.75e-08,25 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!3.30e-55!235;DOID:14566!7.24e-55!239;DOID:0050687!8.94e-29!143;DOID:0050686!4.09e-26!137;DOID:305!8.28e-23!106;DOID:2531!5.73e-18!51;DOID:0060083!5.73e-18!51;DOID:1240!5.66e-14!39;DOID:8692!1.55e-10!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;9.89e-12;39!DOID:2531;1.38e-11;51!DOID:0060083;1.38e-11;51!DOID:8692;2.03e-10;31!DOID:305;1.39e-07;106!DOID:0050687;1.99e-07;143!DOID:14566;4.36e-07;239!DOID:0050686;6.04e-07;137!DOID:3095;7.17e-07;22!DOID:2994;7.17e-07;22!DOID:162;9.92e-07;235 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.01e-56,235;DOID:14566,1.58e-56,239;DOID:0050687,2.63e-29,143;DOID:0050686,1.47e-26,137;DOID:305,2.08e-23,106;DOID:2531,1.18e-18,51;DOID:0060083,1.18e-18,51;DOID:1240,1.71e-14,39;DOID:8692,6.51e-11,31;DOID:3095,7.43e-07,22;DOID:2994,7.43e-07,22 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.281908808191942,0,0,0,0,0.631719873426831,0.261185628199839,1.72013755551056,1.39560233594486,2.18441372130172,1.31883489114227,1.60896258848061,0.662794751455832,4.03395087871065,0.602694528023977,3.65155045193687,0.487932798790507,5.0479633811483,0.816002764977012,0.940364164434263,25.475002854664,17.5199264093292,11.4243802031271,31.5587365739039,29.2278098441807,34.1604790901368,0,0.383829398097213,0.154816123316076,4.59710612239464,0.6024118375565,0.369754010166788,25.4867089909192,24.1687695228617,7.04641054403633,0,0,0.217010870715852,0.671746422719773,1.29557466407592,1.28787783817093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0.368277635987565,0.316462387440884,0.211255286311942,0,0,0,0.150176892841506,0.16072558669708,0,0,0.365328307529268,0,1.09227722252426,0,0.853460445133014,0.800791974072025,0.574752439954483,0,0.954053754535364,0,0,0,0,0.560508562981536,12.9058201539788,0.196709770113833,0,0,2.17342444007882,0,0,0,6.12757512868455,0.589211814949674,0.443067789167242,1.62482318259009,5.37983542847836,3.38154303655683,4.76869923350661,4.42160028457357,7.82468331484642,0,0,0,9.17805675850286,0,0,0.506039384039006,0.318565414324097,0,0.950452044448374,0,0.383959833463255,0,0.236777252044017,0,0.201606743224732,0,0.144824403882799,0,5.36560687762909,7.92747883429888,15.9033227049209,0.50133791063589,1.30361867064741,7.95285947051099,0.486634870302636,17.8670804440088,5.09977614163897,4.65524364173568,5.04269440666194,0.364295288292542,2.59549109949101,0.97364218096405,0.522389211897802,0,0.238490624305342,1.14398982156026,0.371457501329565,4.57153536943422,4.30117297553062,1.73570250803797,0.56530794192401,0,3.30141650328081,3.55291443112578,2.32575083252396,1.42306505074684,2.67776490211736,1.20848795132744,0,0.976248230192678,6.25027236587977,0.81014194788176,19.2887413093612,9.43023365029913,6.19363142658272,0,0.949265659568129,2.5648244150257,0,3.87780264148325,0.872188104285069,0.993943903390637,8.99076632818516,0.794455084879313,15.2023408996871,8.15737279056221,5.60677600142307,0,0.74000264525148,7.78027588499416,3.90660949002095,10.1346379930344,1.36221684880438,0,3.98346434117454,2.80944069147288,2.2818872861778,1.49448680551801,15.0316158264019,13.2735814381868,22.1912274589553,7.14539599392126,14.0031121735415,2.58314452939414,0,1.23633464639278,2.73048408581408,0,24.9137448652018,16.5156446230993,20.2256804303454,9.65750765937843,2.14541457059314,1.50238058906597,13.3849976128825,33.9046411451949,2.34913127700424,2.54318281391474,18.9057390533173,7.31672957592916,6.44101350114073,1.30281799432113,34.5991481094596,11.5950036141826,13.8838575834263,1.19664868234989,2.90962902273861,9.58525899794859,14.6090542430078,7.96934783859292,3.09217365061275,7.36414525595254,3.72845974005705,28.0539524098069,35.783037446801,24.4007280025989,12.3356655468291,15.8962136051646,16.0590037993365,1.56449532329816,0.643240938192885,0,0,0,17.1544860057774,10.4522507848423,14.2196507631254,14.007334537014,15.033681642376,12.338072193777,13.0786368915359,13.3430596285235,13.4661504931237,0,0,0.4115740113314,1.47008711385542,0,0.982827216677626,0,28.6951014619523,15.8655085720616,9.09309394582185,1.09750285408626,0,11.158715937691,11.2957903093406,1.95484983186195,1.03993478527958,11.5465073620219,12.5204837373083,1.40890433082986,2.7429625074604,0.925971025153221,3.23432058798817,3.95102198979638,6.86788929675898,1.47730203652438,2.34004265139238,3.86441021950693,0.93733833986777,1.84780341018745,4.82035330624114,19.1655238584095,20.3443756959773,3.4504441124869,6.89728533054321,8.4526496652697,1.03664057770386,2.01767934783746,0.50496973370552,15.1759967358284,3.4378958300245,0,0,7.50640696734262,9.91132090884928,5.14487578735041,4.14885012077835,2.1798003441664,22.3681771753898,0.258543431515556,0,12.67954128834,2.12750493267896,1.04007436911366,2.31486636835928,2.83698264046557,1.5985330740966,2.00169191121407,0,4.11620168390384,13.3551835560431,1.77695974371273,6.33561498346743,0.301439377059586,0,1.3996218765488,0,0,2.10833939483032,1.91699884393266,0,7.13184525203592,7.52862794671412,2.4657158706046,11.997084537073,11.6568549753268,0.788123040807709,0,0.256686072559497,11.4342580900109,9.10978977003352,10.8260433788877,8.20829700138309,8.29320377149112,0,0,0,0.12269149171914,0.500170521059677,0.813795071099207,0.831883446123229,3.92543775353756,1.57702415033935,1.63997980989798,0,0,0,12.6202863721733,1.10621501125022,10.6866845795742,0,0.343143423810856,0.206768026122887,0.215714200818617,0.106727557803444,0.909382714338778,3.32870879020994,0.907170879989041,0.248107807818777,3.22270143904931,0.280660094433074,0.384417447767103,4.09365799253363,0,0,8.17311377154074,2.66342587969691,14.7828880824856,5.19254429183621,6.97262270759755,12.4485233079371,1.20303882181971,0.0920809889358963,16.4184660875388,9.46874073634929,0.655622074797121,2.25599806453706,10.0119938235739,0,1.46139224653261,11.3995759204306,0,1.530843347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| ||
|short_description=p1@TTK | |||
}} | }} |
Latest revision as of 22:55, 19 September 2015
Short description: | p1@TTK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TTK_5end |
Coexpression cluster: | C109_Reticulocytes_non_acute_Hodgkin_Burkitt_retinoblastoma_lymphoma |
Association with transcript: | 0bp_to_ENST00000509313, uc003pjb.3, uc003pjc.2_5end |
EntrezGene: | TTK |
HGNC: | 12401 |
UniProt: | D6RFY1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.10e-09 | 253 |
neural cell | 8.75e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.01e-56 | 235 |
disease of cellular proliferation | 1.58e-56 | 239 |
cell type cancer | 2.63e-29 | 143 |
organ system cancer | 1.47e-26 | 137 |
carcinoma | 2.08e-23 | 106 |
hematologic cancer | 1.18e-18 | 51 |
immune system cancer | 1.18e-18 | 51 |
leukemia | 1.71e-14 | 39 |
myeloid leukemia | 6.51e-11 | 31 |
germ cell and embryonal cancer | 7.43e-07 | 22 |
germ cell cancer | 7.43e-07 | 22 |