FFCP PHASE1:Hg19::chr2:21228233..21228242,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=338 | |EntrezGene=338 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | ||
|HGNC=603 | |HGNC=603 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=P04114 | |UniProt=P04114 | ||
|association_with_transcript=66bp_to_X03325_5end | |association_with_transcript=66bp_to_X03325_5end | ||
|cluster_id=chr2:21228233..21228242,- | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_56_at_APOB_5end | |description=CAGE_peak_56_at_APOB_5end | ||
Latest revision as of 22:57, 19 September 2015
| Short description: | p56@APOB |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_56_at_APOB_5end |
| Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
| Association with transcript: | 66bp_to_X03325_5end |
| EntrezGene: | APOB |
| HGNC: | 603 |
| UniProt: | P04114 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p56@APOB |
|---|
0.0
2.5
5.0
7.5
10.0
12.5
15.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| hepatocyte | 5.94e-66 | 12 |
| endodermal cell | 8.85e-14 | 58 |
Showing 1 to 2 of 2 entries
| Ontology term | p-value | n |
|---|---|---|
| liver | 1.74e-73 | 19 |
| digestive gland | 1.74e-73 | 19 |
| liver bud | 1.74e-73 | 19 |
| hepatic diverticulum | 1.72e-63 | 22 |
| liver primordium | 1.72e-63 | 22 |
| digestive tract diverticulum | 9.72e-61 | 23 |
| epithelial sac | 6.82e-56 | 25 |
| epithelium of foregut-midgut junction | 6.82e-56 | 25 |
| anatomical boundary | 6.82e-56 | 25 |
| hepatobiliary system | 6.82e-56 | 25 |
Showing 1 to 10 of 44 entries
