FFCP PHASE1:Hg19::chr12:66217414..66217419,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8091 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5009 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-17bp_to_uc001ssp.1_5end | |||
|cluster_id=chr12:66217414..66217419,+ | |||
|description=CAGE_peak_25_at_HMGA2_5end | |||
|id=chr12:66217414..66217419,+ | |||
|ontology_enrichment_celltype=CL:0000066!8.93e-10!254;CL:0002322!7.60e-09!5;CL:0002321!1.01e-08!248;CL:0000220!8.25e-08!246;CL:0000223!4.59e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.99e-19;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.26e-19,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;6.31e-21;11!UBERON:0009497;7.86e-18;13!UBERON:0003056;1.35e-09;3!UBERON:0001041;4.06e-08;30!UBERON:0003104;1.00e-07;31 | |||
|ontology_enrichment_disease=DOID:305!2.87e-07!106;DOID:0050687!6.18e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:4468;1.00e-13;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,1.55e-13,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.95e-12;19!UBERON:0006925;1.95e-12;19!UBERON:0002423;1.29e-09;25!UBERON:0002365;2.47e-07;31!UBERON:0002330;2.47e-07;31!UBERON:0002368;6.10e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.64e-12,19;UBERON:0006925,1.64e-12,19;UBERON:0008836,1.64e-12,19;UBERON:0008835,6.70e-11,22;UBERON:0003894,6.70e-11,22;UBERON:0009854,1.86e-10,23;UBERON:0007499,1.13e-09,25;UBERON:0009497,1.13e-09,25;UBERON:0000015,1.13e-09,25;UBERON:0002423,1.13e-09,25;UBERON:0006235,1.13e-09,25;UBERON:0004161,1.13e-09,25;UBERON:0009856,2.52e-09,26;UBERON:0002365,6.38e-08,31;UBERON:0002330,6.38e-08,31;UBERON:0002368,4.39e-07,35 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0.697801167972428,0.436882744260345,0,0.123766352960047,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0.164201178899891,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0.443458794925128,0.263504357079378,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0.367663080345869,0,0.0892997282840798,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0.560677600142307,0,0.24666754841716,0,0,0,0.151357427644931,0,0,0.624320153660641,0,0,0.117434498643765,0,0.280901613404497,0,0.245668634623536,0.103325781175765,0,0,0,0,0.673344455816265,0.125118519871964,0.554128230968366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0.386521706326594,0.272746120590835,0,0.609868530647977,1.06023814657188,0.813357600086629,0.621966330092223,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491953754172454,0,0.439001141634502,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.224262168690721,0,0.22001485746285,0,0,0.845302752556,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462629081407967,0,0.246381468041427,0,0,0.604297247958111,0,0,0,0.182091168006717,0,0.451199612907412,0.462092022626489,0,0,0.105551628892876,0,0,0,0,0.270946437543853,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0.308097234229289,0.15350367472613,0.275673144969061,0,0.145016693914229,0.170453254832202,0.0890320356467374,0.165284915360978,0.192190067365106,0.765676274967505,0,0,0,0,0,1.06461206063404,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0.202182481573316,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0.845086807596724,0.573645408816206,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0.43050537267123,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0.534120355637366,0,0,0,0,0,0,0,0.191505370132367,0.423347165447766,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242721043499027,0,0.284136146806413,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0.179736702294654,0,0,0,0,0,0,0,0,0,0,0,0.341380344856499,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05499032264014,0.326465616318295,0.141353071433941,0.649165919226273,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664653872707185,0.330991955875499,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0.176512253383001,0,0,0,0,0,0,0,0,0.144090417154106,0.343609788497747,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,1.81201319306614,1.81314888438566,1.88729922791718,0.0984274815147488,0,0,0,0.321506296930038,0.550157746388935,0.415440338029185,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37494122388632,0,0,0,0,0,0,0,0.554805861502613,0,0,0,0,0,0,0.147855149989634,0.159296767163702,0,0,0,0,0,0,0,0,0.363697318405119,0.214821114084977,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0.589848616738702,0,0,0,0,0,0,0.20170506870352,0,0,0,0.443568258651136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0.667388411352415,0,0,0.280272163313789,0,0.215927591218621,0,0,1.89616334079272,0.23248285073625,0.695433089210318,0,0,0,0,0,0.591660003652827,0.340853619036631,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0.198950775161368,0.118920090777569,0.11294608203896,0.219881033490858,0,0.0771741581079447,0.437119121007915,0,0,0,0,0,0,0,0,0,0,0,0.705789743431384,0,0,0,0,0.473314686579554,0,0,0,0,0,0,0.883164973845552,1.20192129160065,0.506794004045748,0.101988829741982,0,0.275684698604535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325613074443898,0,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p25@HMGA2 | |||
}} |
Latest revision as of 23:12, 19 September 2015
Short description: | p25@HMGA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_25_at_HMGA2_5end |
Coexpression cluster: | NA |
Association with transcript: | -17bp_to_uc001ssp.1_5end |
EntrezGene: | HMGA2 |
HGNC: | 5009 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.26e-19 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 1.64e-12 | 19 |
digestive gland | 1.64e-12 | 19 |
liver bud | 1.64e-12 | 19 |
hepatic diverticulum | 6.70e-11 | 22 |
liver primordium | 6.70e-11 | 22 |
digestive tract diverticulum | 1.86e-10 | 23 |
epithelial sac | 1.13e-09 | 25 |
epithelium of foregut-midgut junction | 1.13e-09 | 25 |
anatomical boundary | 1.13e-09 | 25 |
hepatobiliary system | 1.13e-09 | 25 |
foregut-midgut junction | 1.13e-09 | 25 |
septum transversum | 1.13e-09 | 25 |
sac | 2.52e-09 | 26 |
exocrine gland | 6.38e-08 | 31 |
exocrine system | 6.38e-08 | 31 |
endocrine gland | 4.39e-07 | 35 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 1.55e-13 | 2 |