FFCP PHASE1:Hg19::chr3:122085307..122085330,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=131076 | |EntrezGene=131076 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=31136 | |HGNC=31136 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=278bp_to_ENST00000466854_5end | |association_with_transcript=278bp_to_ENST00000466854_5end | ||
|cluster_id=chr3:122085307..122085330,- | |||
|coexpression_cluster_id=C2402 | |||
|description=CAGE_peak_3_at_CCDC58_5end | |description=CAGE_peak_3_at_CCDC58_5end | ||
|id=chr3:122085307..122085330,- | |id=chr3:122085307..122085330,- | ||
|ontology_enrichment_celltype=CL:0000159!2.90e-10!2;CL:0000181!2.18e-09!12;CL:0000417!2.18e-09!12;CL:0000668!2.18e-09!12;CL:0000414!2.18e-09!12;CL:0000412!2.18e-09!12;CL:0000182!2.18e-09!12;CL:0000223!4.35e-08!59;CL:0000066!5.14e-07!254 | |ontology_enrichment_celltype=CL:0000159!2.90e-10!2;CL:0000181!2.18e-09!12;CL:0000417!2.18e-09!12;CL:0000668!2.18e-09!12;CL:0000414!2.18e-09!12;CL:0000412!2.18e-09!12;CL:0000182!2.18e-09!12;CL:0000223!4.35e-08!59;CL:0000066!5.14e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0000313;9.99e-30;1!CL:0000159;1.33e-15;2!CL:0000182;2.13e-10;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,9.99e-30,1;CL:0000159,1.33e-15,2;CL:0000182,2.13e-10,12 | |||
|ontology_enrichment_development_v019=UBERON:0006242;3.16e-29;1!UBERON:0009497;1.08e-09;13 | |||
|ontology_enrichment_disease=DOID:305!9.01e-15!106;DOID:299!2.93e-10!25;DOID:3493!4.54e-10!2;DOID:4929!5.19e-10!2;DOID:0050687!1.24e-09!143 | |||
|ontology_enrichment_disease_v019=DOID:2152;9.99e-30;1!DOID:3493;1.15e-15;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,9.99e-30,1;DOID:3493,1.15e-15,2 | |||
|ontology_enrichment_uberon=UBERON:0009497!1.78e-19!25;UBERON:0000015!1.78e-19!25;UBERON:0002423!1.78e-19!25;UBERON:0006235!1.78e-19!25;UBERON:0004161!1.78e-19!25;UBERON:0001007!1.59e-16!155;UBERON:0001555!1.59e-16!155;UBERON:0007026!1.59e-16!155;UBERON:0004921!2.30e-16!129;UBERON:0004185!2.30e-16!129;UBERON:0002294!9.21e-16!7;UBERON:0001173!9.21e-16!7;UBERON:0004912!9.21e-16!7;UBERON:0008835!4.40e-15!22;UBERON:0003894!4.40e-15!22;UBERON:0003929!7.79e-15!54;UBERON:0004119!1.30e-14!169;UBERON:0000925!1.30e-14!169;UBERON:0006595!1.30e-14!169;UBERON:0009854!2.36e-14!23;UBERON:0007499!4.52e-13!25;UBERON:0009856!1.67e-12!26;UBERON:0000077!2.84e-12!130;UBERON:0005911!1.90e-11!82;UBERON:0002394!7.93e-11!4;UBERON:0003928!7.93e-11!4;UBERON:0001041!2.43e-10!98;UBERON:0005409!6.11e-10!35;UBERON:0000160!1.58e-08!27;UBERON:0002107!5.34e-08!19;UBERON:0006925!5.34e-08!19;UBERON:0008836!5.34e-08!19;UBERON:0000466!3.10e-07!126;UBERON:0002108!5.70e-07!14 | |ontology_enrichment_uberon=UBERON:0009497!1.78e-19!25;UBERON:0000015!1.78e-19!25;UBERON:0002423!1.78e-19!25;UBERON:0006235!1.78e-19!25;UBERON:0004161!1.78e-19!25;UBERON:0001007!1.59e-16!155;UBERON:0001555!1.59e-16!155;UBERON:0007026!1.59e-16!155;UBERON:0004921!2.30e-16!129;UBERON:0004185!2.30e-16!129;UBERON:0002294!9.21e-16!7;UBERON:0001173!9.21e-16!7;UBERON:0004912!9.21e-16!7;UBERON:0008835!4.40e-15!22;UBERON:0003894!4.40e-15!22;UBERON:0003929!7.79e-15!54;UBERON:0004119!1.30e-14!169;UBERON:0000925!1.30e-14!169;UBERON:0006595!1.30e-14!169;UBERON:0009854!2.36e-14!23;UBERON:0007499!4.52e-13!25;UBERON:0009856!1.67e-12!26;UBERON:0000077!2.84e-12!130;UBERON:0005911!1.90e-11!82;UBERON:0002394!7.93e-11!4;UBERON:0003928!7.93e-11!4;UBERON:0001041!2.43e-10!98;UBERON:0005409!6.11e-10!35;UBERON:0000160!1.58e-08!27;UBERON:0002107!5.34e-08!19;UBERON:0006925!5.34e-08!19;UBERON:0008836!5.34e-08!19;UBERON:0000466!3.10e-07!126;UBERON:0002108!5.70e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0004911;9.99e-30;1!UBERON:0002423;1.57e-18;25!UBERON:0002294;4.02e-17;7!UBERON:0001173;4.02e-17;7!UBERON:0004909;1.33e-15;2!UBERON:0002110;1.09e-10;3!UBERON:0002394;1.96e-08;4!UBERON:0003928;1.96e-08;4!UBERON:0002107;6.57e-07;19!UBERON:0006925;6.57e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,9.99e-30,1;UBERON:0009497,1.64e-18,25;UBERON:0000015,1.64e-18,25;UBERON:0002423,1.64e-18,25;UBERON:0006235,1.64e-18,25;UBERON:0004161,1.64e-18,25;UBERON:0004909,1.33e-15,2;UBERON:0002294,1.58e-13,9;UBERON:0001173,1.58e-13,9;UBERON:0004912,1.58e-13,9;UBERON:0008835,2.74e-12,22;UBERON:0003894,2.74e-12,22;UBERON:0009854,8.72e-12,23;UBERON:0007499,6.69e-11,25;UBERON:0002110,1.20e-10,3;UBERON:0006242,1.20e-10,3;UBERON:0009856,1.65e-10,26;UBERON:0003929,7.58e-09,54;UBERON:0002107,6.57e-07,19;UBERON:0006925,6.57e-07,19;UBERON:0008836,6.57e-07,19 | |||
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| ||
|short_description=p3@CCDC58 | |short_description=p3@CCDC58 | ||
}} | }} |
Latest revision as of 23:38, 19 September 2015
Short description: | p3@CCDC58 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CCDC58_5end |
Coexpression cluster: | C2402_signet_serous_bile_Hepatocyte_duodenum_heart_stomach |
Association with transcript: | 278bp_to_ENST00000466854_5end |
EntrezGene: | CCDC58 |
HGNC: | 31136 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 9.99e-30 | 1 |
seromucus secreting cell | 1.33e-15 | 2 |
hepatocyte | 2.13e-10 | 12 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 9.99e-30 | 1 |
epithelium of foregut-midgut junction | 1.64e-18 | 25 |
anatomical boundary | 1.64e-18 | 25 |
hepatobiliary system | 1.64e-18 | 25 |
foregut-midgut junction | 1.64e-18 | 25 |
septum transversum | 1.64e-18 | 25 |
epithelium of gonad | 1.33e-15 | 2 |
biliary system | 1.58e-13 | 9 |
biliary tree | 1.58e-13 | 9 |
biliary bud | 1.58e-13 | 9 |
hepatic diverticulum | 2.74e-12 | 22 |
liver primordium | 2.74e-12 | 22 |
digestive tract diverticulum | 8.72e-12 | 23 |
epithelial sac | 6.69e-11 | 25 |
gallbladder | 1.20e-10 | 3 |
gall bladder primordium | 1.20e-10 | 3 |
sac | 1.65e-10 | 26 |
gut epithelium | 7.58e-09 | 54 |
liver | 6.57e-07 | 19 |
digestive gland | 6.57e-07 | 19 |
liver bud | 6.57e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 9.99e-30 | 1 |
signet ring cell adenocarcinoma | 1.15e-15 | 2 |