FFCP PHASE1:Hg19::chr19:55720851..55720860,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5794 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9672 | |||
|TSSclassifier=strong | |||
|UniProt=C9JCH2,Q9HD43 | |||
|association_with_transcript=13bp_to_ENST00000263434,ENST00000376350,NM_001161440,NM_002842,uc002qjq.2,uc002qjs.2,uc010esv.2_5end | |||
|cluster_id=chr19:55720851..55720860,- | |||
|coexpression_cluster_id=C1341 | |||
|description=CAGE_peak_4_at_PTPRH_5end | |||
|id=chr19:55720851..55720860,- | |||
|ontology_enrichment_celltype=CL:0000066!7.20e-07!254 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0000358;5.72e-18;1!UBERON:0006242;5.72e-18;1 | |||
|ontology_enrichment_disease=DOID:305!5.68e-15!106;DOID:299!7.06e-15!25;DOID:0050687!8.51e-11!143;DOID:3119!3.11e-10!14;DOID:4929!2.23e-09!2;DOID:3493!2.53e-09!2;DOID:162!1.28e-08!235;DOID:14566!2.64e-08!239 | |||
|ontology_enrichment_disease_v019=DOID:3111;1.33e-17;1!DOID:3603;1.33e-17;1!DOID:3493;1.17e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3111,1.44e-17,1;DOID:3603,1.44e-17,1;DOID:3493,1.12e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0005409!4.50e-30!35;UBERON:0000160!1.65e-19!27;UBERON:0004921!8.86e-17!129;UBERON:0004185!8.86e-17!129;UBERON:0001007!1.73e-15!155;UBERON:0001555!1.73e-15!155;UBERON:0007026!1.73e-15!155;UBERON:0002294!1.12e-14!7;UBERON:0001173!1.12e-14!7;UBERON:0004912!1.12e-14!7;UBERON:0004119!1.17e-13!169;UBERON:0000925!1.17e-13!169;UBERON:0006595!1.17e-13!169;UBERON:0000059!1.42e-13!11;UBERON:0000945!6.93e-13!8;UBERON:0010039!6.93e-13!8;UBERON:0001155!7.14e-12!9;UBERON:0000077!4.22e-11!130;UBERON:0002394!7.70e-10!4;UBERON:0003928!7.70e-10!4;UBERON:0004907!5.33e-08!5;UBERON:0002075!9.73e-08!18;UBERON:0001046!4.20e-07!19;UBERON:0002108!5.56e-07!14;UBERON:0003104!5.72e-07!238;UBERON:0009142!5.72e-07!238;UBERON:0000058!7.40e-07!26 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;4.32e-18;22!UBERON:0000160;3.67e-15;17!UBERON:0002108;2.85e-14;4!UBERON:0004921;4.02e-12;33!UBERON:0001155;2.09e-08;9!UBERON:0000059;4.92e-07;11!UBERON:0002110;7.49e-07;3!UBERON:0002106;9.91e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.09e-22,25;UBERON:0000160,3.54e-15,17;UBERON:0002108,2.58e-14,4;UBERON:0000945,4.36e-09,8;UBERON:0010039,4.36e-09,8;UBERON:0001155,2.13e-08,9;UBERON:0000059,5.00e-07,11;UBERON:0002110,8.15e-07,3;UBERON:0006242,8.15e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491953754172454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0.831076008928724,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447352215784832,0.333698283423817,0,0,0,0,0,0,2.05854594449042,0,0,0,0,0,0,0,0,0,0,0,0,0,0.828851746593443,0,0,0,0,0.0898683511473268,0.537063524026827,0,0,0,0,0,0,0,0,0,0,0,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0.141353071433941,0,0.995261931078505,2.21143911258348,3.05515072466813,0,0,0,0,0,0,0,0.586993856796269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0,0,0,0,0,0,0.160317640503067,2.13452994739353,0,0.864542502924636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26787274015176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.887136517302272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0.078493092850514,0,0.560544326627578,0,0.863710364874486,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,2.31644057466312,0,0,0,0,0,0,0,0,0,0,4.78479780269257,1.5299169235277,2.82190377816914,0,0,0,0,0,0,1.2217909337381,0.128915775947154,0,0.357107877211315,0,0.0802413666891683,1.46067277649303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573777643141411,0,0,0,0,0.269475606319761,2.34640942403454,0,0,0.665756774185513,0,0 | |||
|short_description=p4@PTPRH | |||
}} |
Latest revision as of 00:49, 20 September 2015
Short description: | p4@PTPRH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PTPRH_5end |
Coexpression cluster: | C1341_smallcell_small_gall_colon_temporal_signet_adenocarcinoma |
Association with transcript: | 13bp_to_ENST00000263434, ENST00000376350, NM_001161440, NM_002842, uc002qjq.2, uc002qjs.2, uc010esv.2_5end |
EntrezGene: | PTPRH |
HGNC: | 9672 |
UniProt: | C9JCH2Q9HD43 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 1.09e-22 | 25 |
intestine | 3.54e-15 | 17 |
small intestine | 2.58e-14 | 4 |
stomach | 4.36e-09 | 8 |
food storage organ | 4.36e-09 | 8 |
colon | 2.13e-08 | 9 |
large intestine | 5.00e-07 | 11 |
gallbladder | 8.15e-07 | 3 |
gall bladder primordium | 8.15e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cystadenocarcinoma | 1.44e-17 | 1 |
mucinous cystadenocarcinoma | 1.44e-17 | 1 |
signet ring cell adenocarcinoma | 1.12e-09 | 2 |