FFCP PHASE1:Hg19::chrX:153236930..153236978,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chrX:153236930..153236978,-
|short_description=p6@HCFC1
|description=CAGE_peak_6_at_HCFC1_5end
|association_with_transcript=-111bp_to_ENST00000354233,NM_005334,...") |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3054 | |EntrezGene=3054 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4839 | |HGNC=4839 | ||
|TSSclassifier=strong | |||
|UniProt=P51610 | |UniProt=P51610 | ||
|association_with_transcript=-111bp_to_ENST00000354233,NM_005334,uc004fjp.2_5end | |||
|cluster_id=chrX:153236930..153236978,- | |||
|description=CAGE_peak_6_at_HCFC1_5end | |||
|id=chrX:153236930..153236978,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002322;4.14e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,4.07e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.91e-10!82;UBERON:0005743!1.08e-09!86;UBERON:0000073!4.76e-09!94;UBERON:0001016!4.76e-09!94;UBERON:0002616!5.66e-09!59;UBERON:0002780!7.81e-09!41;UBERON:0001890!7.81e-09!41;UBERON:0006240!7.81e-09!41;UBERON:0000955!1.81e-08!69;UBERON:0006238!1.81e-08!69;UBERON:0003080!3.65e-08!42;UBERON:0001869!4.93e-08!32;UBERON:0001893!5.38e-08!34;UBERON:0001049!6.76e-08!57;UBERON:0005068!6.76e-08!57;UBERON:0006241!6.76e-08!57;UBERON:0007135!6.76e-08!57;UBERON:0002791!9.89e-08!33;UBERON:0000956!1.17e-07!25;UBERON:0000203!1.17e-07!25;UBERON:0003056!1.78e-07!61;UBERON:0002020!3.34e-07!34;UBERON:0003528!3.34e-07!34;UBERON:0003075!3.48e-07!86;UBERON:0007284!3.48e-07!86;UBERON:0002619!5.03e-07!22;UBERON:0001950!6.10e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;1.39e-08;20!UBERON:0000956;1.69e-08;25!UBERON:0000203;1.69e-08;25!UBERON:0002619;1.58e-07;22!UBERON:0001869;1.73e-07;32!UBERON:0001893;2.15e-07;34!UBERON:0002791;2.74e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,9.17e-09,20;UBERON:0000956,1.37e-08,25;UBERON:0000203,1.37e-08,25;UBERON:0001893,7.95e-08,34;UBERON:0002619,1.08e-07,22;UBERON:0002791,1.10e-07,32;UBERON:0001869,1.10e-07,32;UBERON:0001017,2.00e-07,81;UBERON:0003528,5.44e-07,34;UBERON:0002020,5.44e-07,34 | |||
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| ||
|short_description=p6@HCFC1 | |||
}} | }} |
Latest revision as of 01:31, 20 September 2015
Short description: | p6@HCFC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_HCFC1_5end |
Coexpression cluster: | NA |
Association with transcript: | -111bp_to_ENST00000354233, NM_005334, uc004fjp.2_5end |
EntrezGene: | HCFC1 |
HGNC: | 4839 |
UniProt: | P51610 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 4.07e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
neocortex | 9.17e-09 | 20 |
cerebral cortex | 1.37e-08 | 25 |
pallium | 1.37e-08 | 25 |
telencephalon | 7.95e-08 | 34 |
regional part of cerebral cortex | 1.08e-07 | 22 |
regional part of telencephalon | 1.10e-07 | 32 |
cerebral hemisphere | 1.10e-07 | 32 |
central nervous system | 2.00e-07 | 81 |
brain grey matter | 5.44e-07 | 34 |
gray matter | 5.44e-07 | 34 |