FFCP PHASE1:Hg19::chr3:124223619..124223628,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8997 | |EntrezGene=8997 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4814 | |HGNC=4814 | ||
|TSSclassifier=strong | |||
|UniProt=O60229 | |UniProt=O60229 | ||
|association_with_transcript=33bp_to_ENST00000393496,uc003ehi.2_5end | |association_with_transcript=33bp_to_ENST00000393496,uc003ehi.2_5end | ||
|cluster_id=chr3:124223619..124223628,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_34_at_KALRN_5end | |description=CAGE_peak_34_at_KALRN_5end | ||
|id=chr3:124223619..124223628,+ | |id=chr3:124223619..124223628,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.22e-27;10!UBERON:0005564;2.22e-27;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000200!3.34e-41!6;UBERON:0002771!3.35e-30!3;UBERON:0002619!1.95e-26!22;UBERON:0007023!1.61e-25!115;UBERON:0000956!2.74e-23!25;UBERON:0000203!2.74e-23!25;UBERON:0001869!5.09e-23!32;UBERON:0001950!2.60e-22!20;UBERON:0002780!4.00e-22!41;UBERON:0001890!4.00e-22!41;UBERON:0006240!4.00e-22!41;UBERON:0001893!1.22e-21!34;UBERON:0003080!1.41e-21!42;UBERON:0003075!3.51e-20!86;UBERON:0007284!3.51e-20!86;UBERON:0002346!3.35e-19!90;UBERON:0001049!5.13e-19!57;UBERON:0005068!5.13e-19!57;UBERON:0006241!5.13e-19!57;UBERON:0007135!5.13e-19!57;UBERON:0002616!2.49e-18!59;UBERON:0003056!1.26e-17!61;UBERON:0002791!1.32e-17!33;UBERON:0002020!4.46e-17!34;UBERON:0003528!4.46e-17!34;UBERON:0005743!5.38e-17!86;UBERON:0000955!3.05e-15!69;UBERON:0006238!3.05e-15!69;UBERON:0000073!3.10e-15!94;UBERON:0001016!3.10e-15!94;UBERON:0001017!3.58e-15!82;UBERON:0002106!5.77e-14!3;UBERON:0004854!5.77e-14!3;UBERON:0009034!5.77e-14!3;UBERON:0002095!5.77e-14!3;UBERON:0004782!5.77e-14!3;UBERON:0003281!5.77e-14!3;UBERON:0009664!5.77e-14!3;UBERON:0002296!5.77e-14!3;UBERON:0005602!5.77e-14!3;UBERON:0001179!5.77e-14!3;UBERON:0006293!5.77e-14!3;UBERON:0001871!9.98e-12!7;UBERON:0002134!1.18e-11!1;UBERON:0005208!1.18e-11!1;UBERON:0005946!1.18e-11!1;UBERON:0005965!1.18e-11!1;UBERON:0002078!1.18e-11!1;UBERON:0000989!1.31e-11!1;UBERON:0008811!1.31e-11!1;UBERON:0006258!1.31e-11!1;UBERON:0005876!1.31e-11!1;UBERON:0004874!1.31e-11!1;UBERON:0007190!1.97e-11!1;UBERON:0002581!2.18e-11!1;UBERON:0002022!2.68e-11!1;UBERON:0002902!2.96e-11!1;UBERON:0009899!2.96e-11!1;UBERON:0000033!1.49e-09!123;UBERON:0004121!3.93e-09!169;UBERON:0003135!4.92e-09!11;UBERON:0000153!4.97e-09!129;UBERON:0007811!4.97e-09!129;UBERON:0000924!7.13e-09!173;UBERON:0006601!7.13e-09!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;7.07e-34;8!UBERON:0003135;5.16e-25;11!UBERON:0000991;1.05e-13;21!UBERON:0003101;3.89e-13;22!UBERON:0000079;3.89e-13;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.50e-34,8;UBERON:0003135,4.86e-25,11;UBERON:0000991,1.02e-13,21;UBERON:0009196,1.02e-13,21;UBERON:0009117,1.02e-13,21;UBERON:0005564,1.02e-13,21;UBERON:0004176,3.77e-13,22;UBERON:0003101,3.77e-13,22;UBERON:0000079,3.77e-13,22;UBERON:0002323,7.30e-07,46 | |||
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|short_description=p34@KALRN | |short_description=p34@KALRN | ||
}} | }} |
Latest revision as of 02:27, 20 September 2015
Short description: | p34@KALRN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_34_at_KALRN_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 33bp_to_ENST00000393496, uc003ehi.2_5end |
EntrezGene: | KALRN |
HGNC: | 4814 |
UniProt: | O60229 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 6.50e-34 | 8 |
male reproductive organ | 4.86e-25 | 11 |
gonad | 1.02e-13 | 21 |
indifferent external genitalia | 1.02e-13 | 21 |
indifferent gonad | 1.02e-13 | 21 |
gonad primordium | 1.02e-13 | 21 |
external genitalia | 3.77e-13 | 22 |
male organism | 3.77e-13 | 22 |
male reproductive system | 3.77e-13 | 22 |
body cavity | 7.30e-07 | 46 |