FFCP PHASE1:Hg19::chr2:216248091..216248096,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2335 | |EntrezGene=2335 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3778 | |HGNC=3778 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=109bp_to_ENST00000490833_5end | |association_with_transcript=109bp_to_ENST00000490833_5end | ||
|cluster_id=chr2:216248091..216248096,- | |||
|coexpression_cluster_id=C79 | |||
|description=CAGE_peak_72_at_FN1_5end | |description=CAGE_peak_72_at_FN1_5end | ||
|id=chr2:216248091..216248096,- | |id=chr2:216248091..216248096,- | ||
|ontology_enrichment_celltype=CL:0000055!3.35e-18!180;CL:0000057!5.72e-13!75;CL:0002371!1.97e-11!591;CL:0002334!2.06e-10!12;CL:0000144!3.78e-09!625;CL:0000680!9.01e-08!57;CL:0000056!9.01e-08!57;CL:0000355!9.01e-08!57;CL:0000048!9.43e-07!430 | |ontology_enrichment_celltype=CL:0000055!3.35e-18!180;CL:0000057!5.72e-13!75;CL:0002371!1.97e-11!591;CL:0002334!2.06e-10!12;CL:0000144!3.78e-09!625;CL:0000680!9.01e-08!57;CL:0000056!9.01e-08!57;CL:0000355!9.01e-08!57;CL:0000048!9.43e-07!430 | ||
|ontology_enrichment_celltype_v019=CL:0002334;1.58e-13;12!CL:0002580;2.73e-11;3!CL:0002579;6.32e-11;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,1.72e-13,12;CL:0002580,7.50e-12,3;CL:0000057,2.05e-10,76;CL:0002579,2.72e-10,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3307;7.72e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,2.78e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0000914!6.20e-09!83;UBERON:0002329!6.20e-09!83;UBERON:0003077!6.20e-09!83;UBERON:0003059!6.20e-09!83;UBERON:0007282!6.20e-09!83;UBERON:0009618!6.20e-09!83;UBERON:0007285!6.20e-09!83;UBERON:0005631!4.26e-08!14;UBERON:0000158!4.26e-08!14;UBERON:0001134!2.08e-07!61;UBERON:0002036!2.08e-07!61;UBERON:0003082!2.08e-07!61;UBERON:0005256!2.36e-07!143;UBERON:0004872!4.61e-07!84;UBERON:0004290!4.98e-07!70;UBERON:0003124!4.99e-07!7;UBERON:0002385!6.88e-07!63;UBERON:0001015!6.88e-07!63;UBERON:0000383!6.88e-07!63;UBERON:0000478!8.57e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;2.34e-09;6!UBERON:0002358;2.34e-09;6!UBERON:0003684;2.34e-09;6!UBERON:0001178;2.34e-09;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,6.68e-09,6;UBERON:0002358,6.68e-09,6;UBERON:0003684,6.68e-09,6;UBERON:0001178,6.68e-09,6 | |||
|phase1_expression=0.54503513781167,1.49870366723688,1.26858963686374,0,0,0,0,0.631719873426831,0,0,0,0.218441372130172,0.791300934685361,0.37129905888014,0,0,0,0,0,0,0.204000691244253,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.75227465255847,0.670700859703636,0.511450247374121,0,1.50401373190767,0.289693037921647,1.5905718941022,16.5455855902896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0.0892997282840798,0,0.112611480483322,0,0,0.183201743930407,0,0,0,3.47880366186723,0.633152558322899,1.19168262731897,0.286836620748814,0,0,1.06748995729705,1.48000529050296,1.55605517699883,0,0.490385709340376,0.605429710579726,2.30470369792,0,0.312160076830321,0,0.597794722207204,0,0,0,0.204154171254893,0,0.103325781175765,1.18800285728205,0.247266929278557,0,0,0.336672227908132,0.125118519871964,0.277064115484183,0,0.30648779579902,0.751190294532984,0.907457465280168,0,0.427114777637135,0.847727604638247,0,0.103052529238439,0,0.37223371266318,1.35021065793013,0,0.757301322732344,0.276149695926898,0.161646056818812,0,0,0.508681776931463,0.193260853163297,0.272746120590835,0,0,0,0.116193942869518,0,0,0,0,0.643240938192885,0,3.25057549622385,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0.590789906681404,0,0,0,0.329250856225877,0,0,0,0,0,0,0.115930404975077,0.352226082707465,0,0,0.570762456703795,0,0,0,0,0,0,0.335964256397719,0.141775097242386,0.716468181622786,0.581267877027924,0.766765358330422,0,0,0,0,0,0,0,0,0,0.308482478109971,0.300343057843917,0,0,0.43596006883328,0.2933531432838,0.258543431515556,0,1.690605505112,0,0,0,0,0.799266537048298,0.142977993658148,1.08524321078289,0.823240336780769,0.65147236858747,0,0,0,0,0.099972991182057,0,0,0,0.718874566474748,0,2.85273810081437,0.289562613335158,1.43833425785268,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0,0.542530047399471,1.24782516918484,1.60586089917446,0.473107245101804,1.87426263988341,0.902838299183157,2.27407504055985,0,0,0.184369168541703,0.260650843404249,0,0.686286847621712,0,0,0,0.303127571446259,1.66435439510497,0.604780586659361,1.73675465473144,1.99500565274481,2.52594084989766,1.02511319404561,1.02341449813341,1.28683136914886,2.96836132889982,0.308419387605311,0.887808626565635,0.0821271560138091,0.519254429183621,0.232420756919918,0.120859449591622,1.20303882181971,0,0.229628896329213,0,0.655622074797121,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0,0.15350367472613,0.275673144969061,0.966782203814463,1.16013355131383,0.340906509664404,0.267096106940212,0.495854746082934,0.768760269460425,1.14851441245126,0.910420027699949,0,0.62962469366128,0,0,0,0,0.18532421910392,0,0.372158369359667,0.632758849437452,0.571890581771475,0,1.28381696410176,0.318203247925937,0.78494864019923,0.719489830333259,0,0.235624804691373,0,0,0,0,0.243713489631284,0,0,0.707027159768564,1.13008116620243,0,1.32687795048244,0,1.15755106853338,0,0.405820753925408,0.30982349809975,0.281695602532241,0.286822704408103,0.0982490410131212,0.7133421029625,0,0.211107635297664,0,0,0.699869440489966,0,0.670302275535787,0,0.188287601553558,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67121139316383,0.296964680832639,0.614321404198464,0,0,1.22439575525196,0,0,1.19548792950642,0.276283915531148,0,0,0,4.66559381492711,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.455768223388005,0,0,0,12.1220440698129,0.457987967009312,18.6562171606522,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0.611030144933625,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0.664653872707185,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0.577901179803038,0,0,0,0.859530882839914,0,0.279282401272254,0.229160424011684,0,0,0,0,0,3.96329871896644,0,0.393915911536118,0.329663433524666,0.202210631562555,0.196854963029498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662091970365432,0,0,0,0,0,0,1.36310417428337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0.151649117541648,0,0,0,0,0.149254802886874,0.467426619694449,0,0.189403005275089,1.76097531226803,1.77962244319307,0.686520205190771,0.756154618816195,0.15543720058278,0.443565449968902,0.159296767163702,0.449803112163605,0.465788870628778,0.829412415681711,1.06336685823198,0.521745061811734,0.150257608997218,0.380805212168795,0,0.181848659202559,0.429642228169954,0,0.796191777397232,0.400027764663154,0.686791410365586,0.336749488765919,0,0,0,0,0,0,0.489473409012935,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0.982829546539238,0,0,0,0,0,0,0,0,0,0,0,0.786329709279482,0,0,0.425149840203366,0.123935764259002,0,0.636008701306837,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3807198521202,0,0,3.83239630536688,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79832133146375,0,0.857440047187092,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0.347716544605159,1.60342272946051,0.62164849248911,0.17071847709395,2.07377898544228,0,0,0,0.423387050190929,0.22910686854405,0,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.58803209657106,0,0,0,0,0.352894871715692,0,0.730336388246517,0,0,0,0,0,0,1.11598505450025,0,1.73050624849516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33639558774184,0.0636471582781649,0,0,0,0.0673520530145875,0,0,0,0,1.9307228228694,0,0,0,0,0,0,0 | |phase1_expression=0.54503513781167,1.49870366723688,1.26858963686374,0,0,0,0,0.631719873426831,0,0,0,0.218441372130172,0.791300934685361,0.37129905888014,0,0,0,0,0,0,0.204000691244253,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.75227465255847,0.670700859703636,0.511450247374121,0,1.50401373190767,0.289693037921647,1.5905718941022,16.5455855902896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0.0892997282840798,0,0.112611480483322,0,0,0.183201743930407,0,0,0,3.47880366186723,0.633152558322899,1.19168262731897,0.286836620748814,0,0,1.06748995729705,1.48000529050296,1.55605517699883,0,0.490385709340376,0.605429710579726,2.30470369792,0,0.312160076830321,0,0.597794722207204,0,0,0,0.204154171254893,0,0.103325781175765,1.18800285728205,0.247266929278557,0,0,0.336672227908132,0.125118519871964,0.277064115484183,0,0.30648779579902,0.751190294532984,0.907457465280168,0,0.427114777637135,0.847727604638247,0,0.103052529238439,0,0.37223371266318,1.35021065793013,0,0.757301322732344,0.276149695926898,0.161646056818812,0,0,0.508681776931463,0.193260853163297,0.272746120590835,0,0,0,0.116193942869518,0,0,0,0,0.643240938192885,0,3.25057549622385,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0.590789906681404,0,0,0,0.329250856225877,0,0,0,0,0,0,0.115930404975077,0.352226082707465,0,0,0.570762456703795,0,0,0,0,0,0,0.335964256397719,0.141775097242386,0.716468181622786,0.581267877027924,0.766765358330422,0,0,0,0,0,0,0,0,0,0.308482478109971,0.300343057843917,0,0,0.43596006883328,0.2933531432838,0.258543431515556,0,1.690605505112,0,0,0,0,0.799266537048298,0.142977993658148,1.08524321078289,0.823240336780769,0.65147236858747,0,0,0,0,0.099972991182057,0,0,0,0.718874566474748,0,2.85273810081437,0.289562613335158,1.43833425785268,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0,0.542530047399471,1.24782516918484,1.60586089917446,0.473107245101804,1.87426263988341,0.902838299183157,2.27407504055985,0,0,0.184369168541703,0.260650843404249,0,0.686286847621712,0,0,0,0.303127571446259,1.66435439510497,0.604780586659361,1.73675465473144,1.99500565274481,2.52594084989766,1.02511319404561,1.02341449813341,1.28683136914886,2.96836132889982,0.308419387605311,0.887808626565635,0.0821271560138091,0.519254429183621,0.232420756919918,0.120859449591622,1.20303882181971,0,0.229628896329213,0,0.655622074797121,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0,0.15350367472613,0.275673144969061,0.966782203814463,1.16013355131383,0.340906509664404,0.267096106940212,0.495854746082934,0.768760269460425,1.14851441245126,0.910420027699949,0,0.62962469366128,0,0,0,0,0.18532421910392,0,0.372158369359667,0.632758849437452,0.571890581771475,0,1.28381696410176,0.318203247925937,0.78494864019923,0.719489830333259,0,0.235624804691373,0,0,0,0,0.243713489631284,0,0,0.707027159768564,1.13008116620243,0,1.32687795048244,0,1.15755106853338,0,0.405820753925408,0.30982349809975,0.281695602532241,0.286822704408103,0.0982490410131212,0.7133421029625,0,0.211107635297664,0,0,0.699869440489966,0,0.670302275535787,0,0.188287601553558,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67121139316383,0.296964680832639,0.614321404198464,0,0,1.22439575525196,0,0,1.19548792950642,0.276283915531148,0,0,0,4.66559381492711,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.455768223388005,0,0,0,12.1220440698129,0.457987967009312,18.6562171606522,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0.611030144933625,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0.664653872707185,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0.577901179803038,0,0,0,0.859530882839914,0,0.279282401272254,0.229160424011684,0,0,0,0,0,3.96329871896644,0,0.393915911536118,0.329663433524666,0.202210631562555,0.196854963029498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662091970365432,0,0,0,0,0,0,1.36310417428337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0.151649117541648,0,0,0,0,0.149254802886874,0.467426619694449,0,0.189403005275089,1.76097531226803,1.77962244319307,0.686520205190771,0.756154618816195,0.15543720058278,0.443565449968902,0.159296767163702,0.449803112163605,0.465788870628778,0.829412415681711,1.06336685823198,0.521745061811734,0.150257608997218,0.380805212168795,0,0.181848659202559,0.429642228169954,0,0.796191777397232,0.400027764663154,0.686791410365586,0.336749488765919,0,0,0,0,0,0,0.489473409012935,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0.982829546539238,0,0,0,0,0,0,0,0,0,0,0,0.786329709279482,0,0,0.425149840203366,0.123935764259002,0,0.636008701306837,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3807198521202,0,0,3.83239630536688,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79832133146375,0,0.857440047187092,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0.347716544605159,1.60342272946051,0.62164849248911,0.17071847709395,2.07377898544228,0,0,0,0.423387050190929,0.22910686854405,0,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.58803209657106,0,0,0,0,0.352894871715692,0,0.730336388246517,0,0,0,0,0,0,1.11598505450025,0,1.73050624849516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33639558774184,0.0636471582781649,0,0,0,0.0673520530145875,0,0,0,0,1.9307228228694,0,0,0,0,0,0,0 | ||
|short_description=p72@FN1 | |short_description=p72@FN1 | ||
}} | }} |
Latest revision as of 02:33, 20 September 2015
Short description: | p72@FN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_72_at_FN1_5end |
Coexpression cluster: | C79_chorionic_Chondrocyte_Cardiac_Smooth_Fibroblast_Preadipocyte_Mesenchymal |
Association with transcript: | 109bp_to_ENST00000490833_5end |
EntrezGene: | FN1 |
HGNC: | 3778 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 1.72e-13 | 12 |
preadipocyte of the breast | 7.50e-12 | 3 |
fibroblast | 2.05e-10 | 76 |
omentum preadipocyte | 2.72e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
omentum | 6.68e-09 | 6 |
peritoneum | 6.68e-09 | 6 |
abdominal cavity | 6.68e-09 | 6 |
visceral peritoneum | 6.68e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
teratoma | 2.78e-08 | 2 |