FFCP PHASE1:Hg19::chr20:10654451..10654491,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=182 | |EntrezGene=182 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6188 | |HGNC=6188 | ||
|TSSclassifier=strong | |||
|UniProt=P78504 | |UniProt=P78504 | ||
|association_with_transcript=116bp_to_ENST00000254958_5end | |association_with_transcript=116bp_to_ENST00000254958_5end | ||
|cluster_id=chr20:10654451..10654491,- | |||
|description=CAGE_peak_5_at_JAG1_5end | |description=CAGE_peak_5_at_JAG1_5end | ||
|id=chr20:10654451..10654491,- | |id=chr20:10654451..10654491,- | ||
|ontology_enrichment_celltype=CL:0000066!8.62e-12!254;CL:0002076!1.45e-11!43;CL:0000223!6.55e-10!59;CL:0002368!1.84e-07!13;CL:0002321!2.80e-07!248;CL:0000220!3.16e-07!246 | |ontology_enrichment_celltype=CL:0000066!8.62e-12!254;CL:0002076!1.45e-11!43;CL:0000223!6.55e-10!59;CL:0002368!1.84e-07!13;CL:0002321!2.80e-07!248;CL:0000220!3.16e-07!246 | ||
|ontology_enrichment_celltype_v019=CL:0000244;2.11e-18;4!CL:0000731;2.11e-18;4!CL:0002368;1.91e-16;13!CL:0002621;3.32e-15;3!CL:0002166;4.01e-15;3!CL:0002144;1.11e-13;3!CL:0002076;3.38e-13;42!CL:0002159;1.62e-11;14!CL:0000317;3.36e-10;2!CL:1000448;3.36e-10;2!CL:0002308;3.36e-10;2!CL:0002140;3.36e-10;2!CL:0002077;4.28e-08;34!CL:0000307;5.81e-07;3 | |ontology_enrichment_celltype_v019=CL:0000244;2.11e-18;4!CL:0000731;2.11e-18;4!CL:0002368;1.91e-16;13!CL:0002621;3.32e-15;3!CL:0002166;4.01e-15;3!CL:0002144;1.11e-13;3!CL:0002076;3.38e-13;42!CL:0002159;1.62e-11;14!CL:0000317;3.36e-10;2!CL:1000448;3.36e-10;2!CL:0002308;3.36e-10;2!CL:0002140;3.36e-10;2!CL:0002077;4.28e-08;34!CL:0000307;5.81e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000244,2.17e-18,4;CL:0000731,2.17e-18,4;CL:0002368,1.90e-16,13;CL:0002076,1.12e-15,42;CL:0002621,3.57e-15,3;CL:0002166,4.51e-15,3;CL:0002144,9.98e-14,3;CL:0000066,3.14e-12,253;CL:0002159,1.59e-11,14;CL:0002321,2.78e-11,250;CL:0000223,1.41e-10,58;CL:0000317,3.07e-10,2;CL:1000448,3.07e-10,2;CL:0002308,3.07e-10,2;CL:0002140,3.07e-10,2;CL:0002077,1.85e-09,34;CL:0000068,5.64e-07,3;CL:0000069,5.64e-07,3;CL:0000307,5.64e-07,3;CL:0000377,5.64e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000377;5.81e-07;3 | |ontology_enrichment_development_v019=CL:0000377;5.81e-07;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000922!7.29e-07!612;UBERON:0000467!7.64e-07!625;UBERON:0000480!9.30e-07!626 | |ontology_enrichment_uberon=UBERON:0000922!7.29e-07!612;UBERON:0000467!7.64e-07!625;UBERON:0000480!9.30e-07!626 | ||
|ontology_enrichment_uberon_v019=UBERON:0000486;3.60e-18;12!UBERON:0001949;3.32e-15;3!UBERON:0000365;9.45e-15;5!UBERON:0010523;1.11e-13;3!UBERON:0001915;1.11e-13;3!UBERON:0001982;1.11e-13;3!UBERON:0005910;2.60e-12;6!UBERON:0001708;1.86e-11;4!UBERON:0008895;1.86e-11;4!UBERON:0002419;3.36e-10;2!UBERON:0007771;3.36e-10;2!UBERON:0003297;3.36e-10;2!UBERON:0001821;3.36e-10;2!UBERON:0003487;3.36e-10;2!UBERON:0001820;3.36e-10;2!UBERON:0011159;3.01e-09;5!UBERON:0003929;9.59e-07;7 | |ontology_enrichment_uberon_v019=UBERON:0000486;3.60e-18;12!UBERON:0001949;3.32e-15;3!UBERON:0000365;9.45e-15;5!UBERON:0010523;1.11e-13;3!UBERON:0001915;1.11e-13;3!UBERON:0001982;1.11e-13;3!UBERON:0005910;2.60e-12;6!UBERON:0001708;1.86e-11;4!UBERON:0008895;1.86e-11;4!UBERON:0002419;3.36e-10;2!UBERON:0007771;3.36e-10;2!UBERON:0003297;3.36e-10;2!UBERON:0001821;3.36e-10;2!UBERON:0003487;3.36e-10;2!UBERON:0001820;3.36e-10;2!UBERON:0011159;3.01e-09;5!UBERON:0003929;9.59e-07;7 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,3.57e-15,3;UBERON:0000365,9.64e-15,5;UBERON:0010523,9.98e-14,3;UBERON:0001915,9.98e-14,3;UBERON:0001982,9.98e-14,3;UBERON:0005910,2.64e-12,6;UBERON:0001708,2.03e-11,4;UBERON:0008895,2.03e-11,4;UBERON:0002419,3.07e-10,2;UBERON:0007771,3.07e-10,2;UBERON:0003297,3.07e-10,2;UBERON:0001821,3.07e-10,2;UBERON:0003487,3.07e-10,2;UBERON:0001820,3.07e-10,2;UBERON:0005089,3.07e-10,2;UBERON:0005088,3.07e-10,2;UBERON:0011159,3.22e-09,5;UBERON:0010188,9.57e-08,6;UBERON:0002539,9.57e-08,6;UBERON:0008816,9.57e-08,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0.487932798790507,0,0,0,0.572471974262113,0.273748850145768,0.627713197974014,0,0,0,0.393364276848904,0,0.154816123316076,0,1.50602959389125,0.369754010166788,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0.619412741790207,0.575384784644301,0.256160706529101,0.709446689665756,0,0,0,0,0,0.224723484445085,0.306083892370903,0,0,0.329851300186716,0.997318288108159,0,0.580418477257168,0.56738522469114,0.622822248995575,0.75374599577023,0.521482918420201,0.217188844705117,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,2.00535164254356,0.434539556882471,0,0.486634870302636,0.0945348171640679,0.221729397462564,0.263504357079378,0.196468613246569,0.364295288292542,0.370784442784429,0,0,0.26591592103773,0.238490624305342,0,0,0,0,0,0,0.419499436209906,0,0.626984899610432,0,0,0.33472061276467,1.20848795132744,2.28081631715554,1.95249646038536,0.735326160691737,0,0,0.22452937262617,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0.49333509683432,0,0.134710672069688,0.163461903113459,0.151357427644931,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0.150238058906597,0.567160915800105,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,5.02478218224572,9.27336810008838,5.44928731239107,0.121973706129595,0,0,0.310983165046111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0.590789906681404,0,0,0.171567810298526,2.30475599358114,0,0.201057944823262,1.20364978706088,0,0,0,0.695582429850461,0.587043471179108,2.88732895522148,0.462985512576611,0.570762456703795,0,0,0,0,0,8.43604505880993,6.38332087155666,3.1190521393325,0.447792613514241,0,0.383382679165211,0.985326475791887,0.088048434013226,0.207328115540772,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.83399768786532,6.89171615004683,0,0.144781306667579,0.205476322550383,0,0,0,0.215627574859517,0.128343036279748,0,0,0.773288812777695,0.167516265334349,0,0,0,0,0,0,0,1.87173775377726,0.535286966391485,0.157702415033935,0,0,0,0,0.664225598535437,0.553107505625109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321707842287215,0,0,0,0,0,0,0.120859449591622,6.41620704970512,0.368323955743585,0,0,0.524497659837696,0,0,1.56869953835371,0,0.527758144464379,0,0,0.215915916102139,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,2.29706215198469,3.90036147621913,0,0,0,0,0,0,0,0,0,2.14870389969272,9.4173133008902,3.95599408733211,4.14746901507755,0,0.31481234683064,0,0,1.06461206063404,0,0.74129687641568,1.43124886741991,0,0.316379424718726,0,0,0,0,0,0,0,0,0.202182481573316,1.58510321173008,0,0,0,0,0,0,0,0,0.66343897524122,0.438450885253763,0,0,0,1.239293992399,0.281695602532241,0,0,0.35667105148125,0,0.211107635297664,0,0,0,0.865999014529609,2.68120910214315,2.17781969722645,0,3.01353760869861,3.36942951335251,2.21715076768338,1.83778720165568,0,0,0,0,0,0,0,0,0,5.77487913158015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0.242721043499027,0,0.568272293612826,0,0,0,0,0,0.222617410045812,0,0.211125408127993,0.597743964753209,0,0,0,0,1.24415835064723,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.796554137998498,0,0,0,0,0.694499979733169,0,0.361789315876224,0,0.221158519862449,0,0.219385397153973,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0.176915129006678,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0.330991955875499,0,0,0.853828638089378,0.693373365065693,0.173559738335131,0.195984794828755,0.261177619741208,0.17472666824203,0,0,0,0,0.290967049465258,0,0.90392296312213,0.137041924646751,0,0.0633107959558787,0,0,0.426905989478705,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0.229160424011684,0,0,0.429226048136571,0,0,0,0,0.236349546921671,0.164831716762333,0.0674035438541849,0,0,0,0.272406812223151,0,0,0,0.449947783103001,0,0,0,0,0.262272940674991,0.211200673038813,0,0,0,0.662091970365432,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332787154610557,0,0,5.37415754237058,0,0.570930667089935,7.05797459094515,0,0,0,0,0,0.189403005275089,0.251567901752575,0,0,0.151230923763239,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,2.52369796457302,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0.211312123358627,0.19998739585493,0.213383459388282,0,0,0,0.279759015438889,1.86623178009892,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0.159633859057151,0,0,0,0.161475645631851,0,0.294443155503077,0.11796972334774,0.183428598521679,0.115525666150338,1.90691047733584,0,0,0,0,0,0,0.327543835020193,0.295712172434091,0,0,0,0,0,0,0.496211178389294,0,1.78867398695433,0,0,0,0,0,0.115233987555779,0,0,0.131545547125698,0,0.667388411352415,0,0,0,0,0,0,0.214429632529969,0,0.23248285073625,0,0.801711364730253,0.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| ||
|short_description=p5@JAG1 | |short_description=p5@JAG1 | ||
}} | }} |
Latest revision as of 03:27, 20 September 2015
Short description: | p5@JAG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_JAG1_5end |
Coexpression cluster: | NA |
Association with transcript: | 116bp_to_ENST00000254958_5end |
EntrezGene: | JAG1 |
HGNC: | 6188 |
UniProt: | P78504 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 2.17e-18 | 4 |
urothelial cell | 2.17e-18 | 4 |
respiratory epithelial cell | 1.90e-16 | 13 |
endo-epithelial cell | 1.12e-15 | 42 |
gingival epithelial cell | 3.57e-15 | 3 |
epithelial cell of Malassez | 4.51e-15 | 3 |
capillary endothelial cell | 9.98e-14 | 3 |
epithelial cell | 3.14e-12 | 253 |
general ecto-epithelial cell | 1.59e-11 | 14 |
embryonic cell | 2.78e-11 | 250 |
endodermal cell | 1.41e-10 | 58 |
sebum secreting cell | 3.07e-10 | 2 |
epithelial cell of sweat gland | 3.07e-10 | 2 |
epithelial cell of skin gland | 3.07e-10 | 2 |
acinar cell of sebaceous gland | 3.07e-10 | 2 |
ecto-epithelial cell | 1.85e-09 | 34 |
duct epithelial cell | 5.64e-07 | 3 |
branched duct epithelial cell | 5.64e-07 | 3 |
tracheal epithelial cell | 5.64e-07 | 3 |
tracheoblast | 5.64e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 3.57e-15 | 3 |
urothelium | 9.64e-15 | 5 |
microcirculatory vessel | 9.98e-14 | 3 |
endothelium of capillary | 9.98e-14 | 3 |
capillary | 9.98e-14 | 3 |
transitional epithelium | 2.64e-12 | 6 |
jaw skeleton | 2.03e-11 | 4 |
splanchnocranium | 2.03e-11 | 4 |
skin gland | 3.07e-10 | 2 |
epidermis gland | 3.07e-10 | 2 |
gland of integumental system | 3.07e-10 | 2 |
sebaceous gland | 3.07e-10 | 2 |
skin sebaceous gland | 3.07e-10 | 2 |
sweat gland | 3.07e-10 | 2 |
sweat gland placode | 3.07e-10 | 2 |
sebaceous gland placode | 3.07e-10 | 2 |
primary subdivision of cranial skeletal system | 3.22e-09 | 5 |
protuberance | 9.57e-08 | 6 |
pharyngeal arch | 9.57e-08 | 6 |
embryonic head | 9.57e-08 | 6 |